RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SEMA6DQ8NFY4 1073 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 OR13C5Q8NGS8 318 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 NANPQ8TBE9 248 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 HPSE2Q8WWQ2 592 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 ERGIC1Q969X5 290 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 ADAT3Q96EY9 351 aaPredicted RBP11.9□□□□□ -0.5
LTBR-209ENST00000541102 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 FN3KRPQ9HA64 309 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 CHCHD3Q9NX63 227 aaKnown RBP11.9□□□□□ -0.5
LTBR-209ENST00000541102 OPN4Q9UHM6 478 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 ZNF391Q9UJN7 358 aa11.9□□□□□ -0.5
LTBR-209ENST00000541102 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.89□□□□□ -0.51
LTBR-209ENST00000541102 A0A1B0GVI7 797 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 ANKRD30BLA7E2S9 258 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 F5H0A9 414 aaPredicted RBP11.89□□□□□ -0.51
LTBR-209ENST00000541102 MYL12BO14950 172 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 CST4P01036 141 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 ISG15P05161 165 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 UBCP0CG48 685 aaKnown RBP11.89□□□□□ -0.51
LTBR-209ENST00000541102 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
LTBR-209ENST00000541102 RIPPLY1Q0D2K3 151 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 CEP78Q5JTW2 689 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 DOK3Q7L591 496 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 KRT74Q7RTS7 529 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 C1QL2Q7Z5L3 287 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 ZNF676Q8N7Q3 588 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 SPERTQ8NA61 448 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 OR5AK2Q8NH90 309 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 ITPKCQ96DU7 683 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 PGLYRP3Q96LB9 341 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 GPR173Q9NS66 373 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 C1orf123Q9NWV4 160 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 RNF7Q9UBF6 113 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 MIOXQ9UGB7 285 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 OR5V1Q9UGF6 321 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 ERGIC3Q9Y282 383 aa11.89□□□□□ -0.51
LTBR-209ENST00000541102 PPIAL4CA0A0B4J2A2 164 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 ZNF816-ZNF321PA0A0X1KG74 233 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 A6NLC8 198 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 VENTXO95231 258 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 RPS11P62280 158 aaKnown RBP eCLIP11.88□□□□□ -0.51
LTBR-209ENST00000541102 ZNF154Q13106 437 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 ZNF404Q494X3 552 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 CCDC58Q4VC31 144 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 TMEM42Q69YG0 159 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 SFRP4Q6FHJ7 346 aaPredicted RBP11.88□□□□□ -0.51
LTBR-209ENST00000541102 RPL22L1Q6P5R6 122 aaKnown RBP11.88□□□□□ -0.51
LTBR-209ENST00000541102 LYPD2Q6UXB3 125 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 RNF144BQ7Z419 303 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 C11orf53Q8IXP5 236 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 OR8B3Q8NGG8 313 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 OR8S1Q8NH09 359 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 Q8TCH9 128 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 ZNF418Q8TF45 676 aaPredicted RBP11.88□□□□□ -0.51
LTBR-209ENST00000541102 OR5P3Q8WZ94 311 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 GHSRQ92847 366 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 FGGYQ96C11 551 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 ORAI1Q96D31 301 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 NEIL1Q96FI4 390 aaPredicted RBP11.88□□□□□ -0.51
LTBR-209ENST00000541102 OR8B2Q96RD0 313 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 MND1Q9BWT6 205 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 SSBP3Q9BWW4 388 aaPredicted RBP11.88□□□□□ -0.51
LTBR-209ENST00000541102 LRCH1Q9Y2L9 728 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
LTBR-209ENST00000541102 hCG_1807616A0A1W2PRN6 198 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 ANKRD61A6NGH8 418 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 TMEM212A6NML5 194 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 A8MXK9 166 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
LTBR-209ENST00000541102 PTBP3O95758 552 aaKnown RBP11.87□□□□□ -0.51
LTBR-209ENST00000541102 ATP6V1B1P15313 513 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 ZNF12P17014 697 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 CD80P33681 288 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 GABARAPL2P60520 117 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 GNB2P62879 340 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 EMX1Q04741 257 aaPredicted RBP11.87□□□□□ -0.51
LTBR-209ENST00000541102 MZT1Q08AG7 82 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
LTBR-209ENST00000541102 INSL4Q14641 139 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 SPHARQ15513 63 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 MED22Q15528 200 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 UBE2V2Q15819 145 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 TMEM244Q5VVB8 128 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 MOB3CQ70IA8 216 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 NLRC3Q7RTR2 1065 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 OR13C3Q8NGS6 347 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 C22orf15Q8WYQ4 148 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 SMIM19Q96E16 107 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
LTBR-209ENST00000541102 TRIM36Q9NQ86 728 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 C14orf119Q9NWQ9 140 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 ENPP5Q9UJA9 477 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 HHLA2Q9UM44 414 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
LTBR-209ENST00000541102 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
LTBR-209ENST00000541102 IGKV1-9A0A0C4DH69 117 aa11.86□□□□□ -0.51
LTBR-209ENST00000541102 LGALS8O00214 317 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms