RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ERVK13-1Q9NX77 482 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 ERVK-18Q9QC07 812 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 HSPE1-MOB4S4R3N1 261 aa10.9□□□□□ -0.66
LTBR-208ENST00000541005 STAB1Q9NY15 2570 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 FBN1P35555 2871 aaKnown RBP10.89□□□□□ -0.67
LTBR-208ENST00000541005 IGHV3OR15-7A0A075B7D8 119 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 KIR2DS1A0A191URI9 304 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 OR4C45A6NMZ5 311 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 C22orf46C9J442 243 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 H0YAE9 185 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 J3QT63 122 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 ENSAO43768 121 aaKnown RBP10.89□□□□□ -0.67
LTBR-208ENST00000541005 FCN3O75636 299 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 CLIC3O95833 236 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 HTR1AP08908 422 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 ADRA2CP18825 462 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 EPHA1P21709 976 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 MPZP25189 248 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 ELF3P78545 371 aaPredicted RBP10.89□□□□□ -0.67
LTBR-208ENST00000541005 MRPL28Q13084 256 aaKnown RBP10.89□□□□□ -0.67
LTBR-208ENST00000541005 SMN1Q16637 294 aaKnown RBP10.89□□□□□ -0.67
LTBR-208ENST00000541005 TMEM244Q5VVB8 128 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 DHRSXQ8N5I4 330 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 MRI1Q9BV20 369 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 ADI1Q9BV57 179 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 WDR13Q9H1Z4 485 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 PLEKHA1Q9HB21 404 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 SMURF1Q9HCE7 757 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 GPR173Q9NS66 373 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 FRRS1LQ9P0K9 344 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 AUP1Q9Y679 476 aa10.89□□□□□ -0.67
LTBR-208ENST00000541005 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 IRGMA1A4Y4 181 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 TMPRSS2O15393 492 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 AKR7A2O43488 359 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 RHBDL1O75783 438 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 GATBO75879 557 aaKnown RBP10.88□□□□□ -0.67
LTBR-208ENST00000541005 RPSAP08865 295 aaKnown RBP10.88□□□□□ -0.67
LTBR-208ENST00000541005 LIMS3P0CW19 117 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 LIMS4P0CW20 117 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 AMY2BP19961 511 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 CAPGP40121 348 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 TGM4P49221 684 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 ODF4Q2M2E3 257 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 CD276Q5ZPR3 534 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 HAGHLQ6PII5 290 aaPredicted RBP10.88□□□□□ -0.67
LTBR-208ENST00000541005 SLC36A1Q7Z2H8 476 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 LHFPL3Q86UP9 236 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 ZNF573Q86YE8 665 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 ANGPTL6Q8NI99 470 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 ZNF671Q8TAW3 534 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 CNIH3Q8TBE1 160 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 FBLIM1Q8WUP2 373 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 PP6455Q8WZ26 134 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 UPRTQ96BW1 309 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 SEH1LQ96EE3 360 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 MDFIQ99750 246 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 NUDT16L1Q9BRJ7 211 aaKnown RBP10.88□□□□□ -0.67
LTBR-208ENST00000541005 VCXQ9H320 206 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 RASL12Q9NYN1 266 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 POLDIP2Q9Y2S7 368 aa10.88□□□□□ -0.67
LTBR-208ENST00000541005 J3QLW9 94 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 DVL1O14640 695 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 GPR37O15354 613 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 TCF21O43680 179 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 NOS1APO75052 506 aaPredicted RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 ECDO95905 644 aaPredicted RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 LIPFP07098 398 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 ACAA1P09110 424 aaPredicted RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 PGA5P0DJD9 388 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 ZNF19P17023 458 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 DCKP27707 260 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 HAAOP46952 286 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 ALKBH1Q13686 389 aaKnown RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 UBE2V2Q15819 145 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 ARMCX4Q5H9R4 360 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 DMRTC1Q5HYR2 192 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 KLF17Q5JT82 389 aaPredicted RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 ZNF788Q6ZQV5 615 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 USP43Q70EL4 1123 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 RDH10Q8IZV5 341 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 POC1AQ8NBT0 407 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 RPS4Y2Q8TD47 263 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 TMEM158Q8WZ71 300 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 DMRTB1Q96MA1 342 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 CCL13Q99616 98 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 NRIP2Q9BQI9 281 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 PKIBQ9C010 78 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 ISG20L2Q9H9L3 353 aaKnown RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 NLKQ9UBE8 527 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 NKX1-2Q9UD57 310 aaPredicted RBP10.87□□□□□ -0.67
LTBR-208ENST00000541005 ZNF222Q9UK12 451 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 HHLA2Q9UM44 414 aa10.87□□□□□ -0.67
LTBR-208ENST00000541005 A0A1B0GW55 424 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 A6NIN4 97 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 NKX6-3A6NJ46 265 aa10.86□□□□□ -0.67
LTBR-208ENST00000541005 TMEM212A6NML5 194 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms