RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PAX8Q06710 450 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 MICBQ29980 383 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 STUMQ69YW2 141 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 SYS1Q8N2H4 156 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 AQP3Q92482 292 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 JAM3Q9BX67 310 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 RASSF4Q9H2L5 321 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 FGF20Q9NP95 211 aaPredicted RBP14.04□□□□□ -0.16
CD9-209ENST00000540891 INPP5EQ9NRR6 644 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 ERVK-18Q9QC07 812 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 KAAG1Q9UBP8 84 aa14.04□□□□□ -0.16
CD9-209ENST00000540891 WNK2Q9Y3S1 2297 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 ANKRD61A6NGH8 418 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 OR4C45A6NMZ5 311 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 E9PI62 339 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 ISG15P05161 165 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 HTR1AP08908 422 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 GNAO1P09471 354 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 LIMS3P0CW19 117 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 LIMS4P0CW20 117 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 CAPGP40121 348 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 NPY4RP50391 375 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 CCR9P51686 369 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 SRSF2Q01130 221 aaKnown RBP14.03□□□□□ -0.16
CD9-209ENST00000540891 SLC34A1Q06495 639 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 UBE2V2Q15819 145 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 KLHL22Q53GT1 634 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 LAIR2Q6ISS4 152 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 HAGHLQ6PII5 290 aaPredicted RBP14.03□□□□□ -0.16
CD9-209ENST00000540891 FGFRL1Q8N441 504 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 CCDC54Q8NEL0 328 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 OR5T2Q8NGG2 359 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 OR10AC1Q8NH08 325 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 NRG4Q8WWG1 115 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 RAB40AQ8WXH6 277 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 C12orf43Q96C57 262 aaKnown RBP14.03□□□□□ -0.16
CD9-209ENST00000540891 TECTBQ96PL2 329 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 CCL13Q99616 98 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 SNTG1Q9NSN8 517 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 MXRA5Q9NR99 2828 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 FBN1P35555 2871 aaKnown RBP14.03□□□□□ -0.16
CD9-209ENST00000540891 DNHD1Q96M86 4753 aa14.03□□□□□ -0.16
CD9-209ENST00000540891 KIR2DS1A0A191URI9 304 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 H0YAE9 185 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 DVL1O14640 695 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 SYNGR1O43759 233 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 TFF1P04155 84 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 IL18R1Q13478 541 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 ALKBH1Q13686 389 aaKnown RBP14.02□□□□□ -0.17
CD9-209ENST00000540891 KLF17Q5JT82 389 aaPredicted RBP14.02□□□□□ -0.17
CD9-209ENST00000540891 TMEM244Q5VVB8 128 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 EGFL6Q8IUX8 553 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 TEX29Q8N6K0 151 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 FAM216BQ8N7L0 139 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 SETD9Q8NE22 299 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 NANPQ8TBE9 248 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 ADAT3Q96EY9 351 aaPredicted RBP14.02□□□□□ -0.17
CD9-209ENST00000540891 CHST5Q9GZS9 411 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 PLEKHA1Q9HB21 404 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 AUP1Q9Y679 476 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 HSPE1-MOB4S4R3N1 261 aa14.02□□□□□ -0.17
CD9-209ENST00000540891 TMPRSS2O15393 492 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 SELLP14151 372 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 HAAOP46952 286 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 TGM4P49221 684 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 ATPAF1Q5TC12 328 aaPredicted RBP14.01□□□□□ -0.17
CD9-209ENST00000540891 ZNF573Q86YE8 665 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 CALHM1Q8IU99 346 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 OR51A4Q8NGJ6 313 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 ANGPTL6Q8NI99 470 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 TRMT10AQ8TBZ6 339 aaKnown RBP14.01□□□□□ -0.17
CD9-209ENST00000540891 FBLIM1Q8WUP2 373 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 C10orf35Q96D05 121 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 MRPL48Q96GC5 212 aaKnown RBP14.01□□□□□ -0.17
CD9-209ENST00000540891 ZNF488Q96MN9 340 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 NUDT16L1Q9BRJ7 211 aaKnown RBP14.01□□□□□ -0.17
CD9-209ENST00000540891 MRI1Q9BV20 369 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 NLKQ9UBE8 527 aa14.01□□□□□ -0.17
CD9-209ENST00000540891 IGKV1-27A0A075B6S5 117 aa14□□□□□ -0.17
CD9-209ENST00000540891 IGKV1-9A0A0C4DH69 117 aa14□□□□□ -0.17
CD9-209ENST00000540891 J3QT63 122 aa14□□□□□ -0.17
CD9-209ENST00000540891 EPHA1P21709 976 aa14□□□□□ -0.17
CD9-209ENST00000540891 GLRA1P23415 457 aa14□□□□□ -0.17
CD9-209ENST00000540891 MPZP25189 248 aa14□□□□□ -0.17
CD9-209ENST00000540891 ETV1P50549 477 aa14□□□□□ -0.17
CD9-209ENST00000540891 BTNL3Q6UXE8 466 aa14□□□□□ -0.17
CD9-209ENST00000540891 ZNF788Q6ZQV5 615 aa14□□□□□ -0.17
CD9-209ENST00000540891 POC1AQ8NBT0 407 aa14□□□□□ -0.17
CD9-209ENST00000540891 ZNF671Q8TAW3 534 aa14□□□□□ -0.17
CD9-209ENST00000540891 NPRL2Q8WTW4 380 aa14□□□□□ -0.17
CD9-209ENST00000540891 TFAP2CQ92754 450 aa14□□□□□ -0.17
CD9-209ENST00000540891 GAFA1Q96PS6 74 aa14□□□□□ -0.17
CD9-209ENST00000540891 MYCBPQ99417 103 aaPredicted RBP14□□□□□ -0.17
CD9-209ENST00000540891 DNAJB11Q9UBS4 358 aa14□□□□□ -0.17
CD9-209ENST00000540891 DOCK11Q5JSL3 2073 aa13.99□□□□□ -0.17
CD9-209ENST00000540891 IGKV1D-17A0A075B6S4 117 aa13.99□□□□□ -0.17
CD9-209ENST00000540891 FAM230AA0A1W2PPH8 454 aa13.99□□□□□ -0.17
CD9-209ENST00000540891 OR2AT4A6NND4 320 aa13.99□□□□□ -0.17
CD9-209ENST00000540891 ENSAO43768 121 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms