RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ZNF432	O94892	652 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AGFG2	O95081	481 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SFTPB	P07988	381 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HOXB5	P09067	269 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	FAM87A	P0C7U9	286 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RAB6A	P20340	208 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	S1PR1	P21453	382 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GNAL	P38405	381 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	EIF1AX	P47813	144 aa	Known RBP	5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SELENOV	P59797	346 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RPS4X	P62701	263 aa	Known RBP	5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PGAP1	Q75T13	922 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	LINC00346	Q8IVM7	164 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GPR137C	Q8N3F9	429 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF615	Q8N8J6	731 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	LRRC75A	Q8NAA5	344 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SLC30A7	Q8NEW0	376 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR13C3	Q8NGS6	347 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OTOS	Q8NHW6	89 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CPT1C	Q8TCG5	803 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF721	Q8TF20	911 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TAAR8	Q969N4	342 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR5B2	Q96R09	309 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PRRT1	Q99946	306 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CNTNAP3	Q9BZ76	1288 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	METTL8	Q9H825	291 aa	Known RBP	5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GLRX2	Q9NS18	164 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TMEM100	Q9NV29	134 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	VDAC3	Q9Y277	283 aa		5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ANKRD11	Q6UB99	2663 aa	Predicted RBP	5	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		F8VVB4	439 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		F8VWA3	439 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		G3V3Y1	287 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	P2RY10	O00398	339 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CLN5	O75503	358 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HTR3B	O95264	441 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CD2	P06729	351 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR8U9	P0C7N5	309 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CAV2	P51636	162 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SLC25A1	P53007	311 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CARD18	P57730	90 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MRPL49	Q13405	166 aa	Known RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RAB32	Q13637	225 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	FAM166A	Q6J272	317 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ADGRE4P	Q86SQ3	457 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	FAM24B	Q8N5W8	94 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR2M7	Q8NG81	312 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR8U1	Q8NH10	309 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ASB13	Q8WXK3	278 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MAFIP	Q8WZ33	124 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CTHRC1	Q96CG8	243 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR8B4	Q96RC9	309 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CENPM	Q9NSP4	180 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PLA2G2E	Q9NZK7	142 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SH3BGRL2	Q9UJC5	107 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	AMDHD2	Q9Y303	409 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HDGFL3	Q9Y3E1	203 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SPTA1	P02549	2419 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HSPB2	A8KAH6	182 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	WDR1	O75083	606 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	MELTF	P08582	738 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SMIM6	P0DI80	62 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	ZNF43	P17038	809 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TACR3	P29371	465 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	PLP2	Q04941	152 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SRSF4	Q08170	494 aa	Known RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	TOMM34	Q15785	309 aa	Predicted RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HSPB2	Q16082	182 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CDPF1	Q6NVV7	123 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RNF128	Q8TEB7	428 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR10C1	Q96KK4	312 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	VSTM2L	Q96N03	204 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CNTD2	Q9H8S5	307 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SEC61A2	Q9H9S3	476 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GDF2	Q9UK05	429 aa	Predicted RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	HIF3A	Q9Y2N7	669 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783		A6NIZ1	184 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RAB27B	O00194	218 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SDCBP	O00560	298 aa	Predicted RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	YIF1A	O95070	293 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	GUSB	P08236	651 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CT45A8	P0DMV1	189 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CT45A9	P0DMV2	189 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CTLA4	P16410	223 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SFTPD	P35247	375 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	UBE2N	P61088	152 aa	Known RBP	4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RAP1B	P61224	184 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	RAP1A	P62834	184 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	EGR3	Q06889	387 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	CT45A2	Q5DJT8	189 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	LCN10	Q6JVE6	187 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	DRAM2	Q6UX65	266 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	UEVLD	Q8IX04	471 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	SKA3	Q8IX90	412 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	OR10G3	Q8NGC4	313 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	FGGY	Q96C11	551 aa		4.99	□□□□□ -1.61
RAPGEF4-215	ENST00000540783	KIRREL1	Q96J84	757 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms