RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 BAHD1Q8TBE0 780 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 TVP23CQ96ET8 276 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 MMABQ96EY8 250 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 FBXO34Q9NWN3 711 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 FOXJ2Q9P0K8 574 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 TMED3Q9Y3Q3 217 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 MSGN1A6NI15 193 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ZNF724A8MTY0 619 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 TOX3O15405 576 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 CD5P06127 495 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 LIFP15018 202 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ZNF823P16415 610 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 FBLP22087 321 aaKnown RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 SLC2A5P22732 501 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 CSNK2A1P68400 391 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 IQCJQ1A5X6 159 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 RNF151Q2KHN1 245 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ZNF429Q86V71 674 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 SLC35G3Q8N808 338 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 C19orf47Q8N9M1 422 aaKnown RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 CSNK2A3Q8NEV1 391 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 CABLES2Q9BTV7 478 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ST6GALNAC5Q9BVH7 336 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ADAM19Q9H013 955 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 KIR3DX1Q9H7L2 352 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 C1orf123Q9NWV4 160 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 DKK4Q9UBT3 224 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 POLR1DQ9Y2S0 133 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 FLNBO75369 2602 aaKnown RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 SCN8AQ9UQD0 1980 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 CENPVL1A0A0U1RR11 272 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 A0A1W2PPV9 198 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 H7C1C5 153 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 CST2P09228 141 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 LCN6P62502 163 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ALG10Q5BKT4 473 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 KLHL24Q6TFL4 600 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 COX15Q7KZN9 410 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 MAMDC2Q7Z304 686 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 EXD3Q8N9H8 876 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 MFSD9Q8NBP5 474 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 OR51F2Q8NH61 342 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 TMEM18Q96B42 140 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 WDR76Q9H967 626 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 PITPNC1Q9UKF7 332 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 HHLA2Q9UM44 414 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 FLVCR1Q9Y5Y0 555 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 A6NIZ1 184 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 K7ENP7 123 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 GEMIN2O14893 280 aaKnown RBP7.71□□□□□ -1.17
DDB1-217ENST00000540166 RPLP1P05386 114 aaKnown RBP7.71□□□□□ -1.17
DDB1-217ENST00000540166 EMP2P54851 167 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 TMEM33P57088 247 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 RAP1BP61224 184 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 SLC18B1Q6NT16 456 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 INO80CQ6PI98 192 aaPredicted RBP7.71□□□□□ -1.17
DDB1-217ENST00000540166 LANCL3Q6ZV70 420 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 OR10AC1Q8NH08 325 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 ROBO4Q8WZ75 1007 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 SERINC2Q96SA4 455 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 TIMP4Q99727 224 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 MYOZ1Q9NP98 299 aaPredicted RBP7.71□□□□□ -1.17
DDB1-217ENST00000540166 TAS2R4Q9NYW5 299 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 FRRS1LQ9P0K9 344 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 RAB22AQ9UL26 194 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 C21orf140B9A014 251 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 H3BQ15 152 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 KLF4O43474 513 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 MPIG6BO95866 241 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 SLC2A1P11166 492 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 CXCR1P25024 350 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 IL2RGP31785 369 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 HNF4GQ14541 408 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 MEP1BQ16820 701 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 CDPF1Q6NVV7 123 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 SHISA6Q6ZSJ9 500 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 SSX7Q7RTT5 188 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 TIPARPQ7Z3E1 657 aaKnown RBP7.71□□□□□ -1.17
DDB1-217ENST00000540166 FOXN4Q96NZ1 517 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 GFI1Q99684 422 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.71□□□□□ -1.17
DDB1-217ENST00000540166 PRR13Q9NZ81 148 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 HIF3AQ9Y2N7 669 aa7.71□□□□□ -1.17
DDB1-217ENST00000540166 DENND4CQ5VZ89 1909 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 PLXND1Q9Y4D7 1925 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 F13BP05160 661 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 FAM157CP0CG43 387 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 ZNF20P17024 532 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 RPS23P62266 143 aaKnown RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 RPL23AP62750 156 aaKnown RBP7.71□□□□□ -1.18
DDB1-217ENST00000540166 KLRB1Q12918 225 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 CLN3Q13286 438 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 ANGPTL5Q86XS5 388 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 C1QL4Q86Z23 238 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 OR13C8Q8NGS7 320 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 PRR7Q8TB68 274 aa7.71□□□□□ -1.18
DDB1-217ENST00000540166 MALSU1Q96EH3 234 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms