RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 OR51S1Q8NGJ8 323 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 DEDD2Q8WXF8 326 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 DACT3Q96B18 629 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 TINAGL1Q9GZM7 467 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 ACTR6Q9GZN1 396 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 GHITMQ9H3K2 345 aa19.35■□□□□ 0.69
HOMER3-204ENST00000539827 ZNF629Q9UEG4 869 aaPredicted RBP19.35■□□□□ 0.69
HOMER3-204ENST00000539827 C7orf66A4D0T2 115 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 NDUFB6O95139 128 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 CYB5AP00167 134 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 IL32P24001 234 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 RCVRNP35243 200 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 NKX2-5P52952 324 aaPredicted RBP19.34■□□□□ 0.69
HOMER3-204ENST00000539827 RAG2P55895 527 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 GNG2P59768 71 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 FAM189A2Q15884 450 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 KRTCAP3Q53RY4 240 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 SPATA46Q5T0L3 261 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 CISD2Q8N5K1 135 aaKnown RBP19.34■□□□□ 0.69
HOMER3-204ENST00000539827 WDR31Q8NA23 367 aa19.34■□□□□ 0.69
HOMER3-204ENST00000539827 WDR1O75083 606 aa19.33■□□□□ 0.69
HOMER3-204ENST00000539827 BLVRBP30043 206 aaPredicted RBP19.33■□□□□ 0.69
HOMER3-204ENST00000539827 TECTBQ96PL2 329 aa19.33■□□□□ 0.69
HOMER3-204ENST00000539827 FYTTD1Q96QD9 318 aaKnown RBP19.33■□□□□ 0.69
HOMER3-204ENST00000539827 TM2D1Q9BX74 207 aa19.33■□□□□ 0.69
HOMER3-204ENST00000539827 FGF23Q9GZV9 251 aaPredicted RBP19.33■□□□□ 0.69
HOMER3-204ENST00000539827 OR51J1Q9H342 316 aa19.33■□□□□ 0.69
HOMER3-204ENST00000539827 CDH20Q9HBT6 801 aa19.33■□□□□ 0.69
HOMER3-204ENST00000539827 IGKV1-12A0A0C4DH73 117 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 CD300LBA8K4G0 201 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 ZNF736B4DX44 427 aaPredicted RBP19.33■□□□□ 0.68
HOMER3-204ENST00000539827 PEX14O75381 377 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 IGKV1D-12P01611 117 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 GSTP1P09211 210 aaKnown RBP19.33■□□□□ 0.68
HOMER3-204ENST00000539827 ST3GAL2Q16842 350 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 BHLHE23Q8NDY6 225 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 GINS4Q9BRT9 223 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 IFT46Q9NQC8 304 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 ACACAQ13085 2346 aa19.33■□□□□ 0.68
HOMER3-204ENST00000539827 FOXI3A8MTJ6 420 aaPredicted RBP19.32■□□□□ 0.68
HOMER3-204ENST00000539827 MFNGO00587 321 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 ICMTO60725 284 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 CSTBP04080 98 aaKnown RBP19.32■□□□□ 0.68
HOMER3-204ENST00000539827 GABRR1P24046 479 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 HOXC12P31275 282 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 PDZK1IP1Q13113 114 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 ZNF324BQ6AW86 544 aaPredicted RBP19.32■□□□□ 0.68
HOMER3-204ENST00000539827 OR52W1Q6IF63 320 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 ASCL4Q6XD76 172 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 Q8NA96 180 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 CSNK2A3Q8NEV1 391 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 OR5L1Q8NGL2 311 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 CCDC120Q96HB5 630 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 MED28Q9H204 178 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 FIGNL2A6NMB9 653 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 CST4P01036 141 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 CSN2P05814 226 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 HOXB1P14653 301 aaPredicted RBP19.32■□□□□ 0.68
HOMER3-204ENST00000539827 RAD52P43351 418 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 FCN2Q15485 313 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 CALHM1Q8IU99 346 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 ZDHHC23Q8IYP9 409 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 FAM57AQ8TBR7 257 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 PECRQ9BY49 303 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 OPA3Q9H6K4 179 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 RAXQ9Y2V3 346 aa19.32■□□□□ 0.68
HOMER3-204ENST00000539827 LILRA1O75019 489 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 IL2RAP01589 272 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 CD74P04233 296 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 AMY2AP04746 511 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 ANXA7P20073 488 aaKnown RBP19.31■□□□□ 0.68
HOMER3-204ENST00000539827 CPT2P23786 658 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 PLA2G5P39877 138 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 OR2T2Q6IF00 324 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 C1orf162Q8NEQ5 155 aaPredicted RBP19.31■□□□□ 0.68
HOMER3-204ENST00000539827 HPSE2Q8WWQ2 592 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 ZNF486Q96H40 463 aaPredicted RBP19.31■□□□□ 0.68
HOMER3-204ENST00000539827 Q96M66 194 aa19.31■□□□□ 0.68
HOMER3-204ENST00000539827 EIF3KQ9UBQ5 218 aaKnown RBP19.31■□□□□ 0.68
HOMER3-204ENST00000539827 ZNF107Q9UII5 783 aaPredicted RBP19.31■□□□□ 0.68
HOMER3-204ENST00000539827 INTS1Q8N201 2190 aaKnown RBP19.3■□□□□ 0.68
HOMER3-204ENST00000539827 PYCARD-AS1I3L0S3 204 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 HPXP02790 462 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 ZNF735P0CB33 412 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 CBR1P16152 277 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 PTGER4P35408 488 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 MRPL49Q13405 166 aaKnown RBP19.3■□□□□ 0.68
HOMER3-204ENST00000539827 ARFRP1Q13795 201 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 RBMS2Q15434 407 aaKnown RBP19.3■□□□□ 0.68
HOMER3-204ENST00000539827 PNLIPRP3Q17RR3 467 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 ZFP69Q49AA0 526 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 BATF2Q8N1L9 274 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 MGAQ8IWI9 3026 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 PQLC2LA1A4F0 135 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 SMPD2O60906 423 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 BPIFB2Q8N4F0 458 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 OR51F2Q8NH61 342 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 SEC22CQ9BRL7 303 aa19.3■□□□□ 0.68
HOMER3-204ENST00000539827 PRRC2CQ9Y520 2896 aaKnown RBP19.29■□□□□ 0.68
HOMER3-204ENST00000539827 CACNA1GO43497 2377 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms