RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 S100A7AQ86SG5 101 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 C10orf90Q96M02 699 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 V9GYH0 126 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 IGHV1OR21-1A0A087WYE8 117 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 F6UZH7 168 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 WISP3O95389 354 aaPredicted RBP12.97□□□□□ -0.33
CACNB1-206ENST00000539338 KISS1Q15726 138 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF141Q15928 474 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 ETFDHQ16134 617 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 OR10P1Q8NGE3 313 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 LIN7CQ9NUP9 197 aaKnown RBP12.97□□□□□ -0.33
CACNB1-206ENST00000539338 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
CACNB1-206ENST00000539338 CST7O76096 145 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 DEFA4P12838 97 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF705AQ6ZN79 300 aaPredicted RBP12.96□□□□□ -0.33
CACNB1-206ENST00000539338 SSX8Q7RTT4 187 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 UBALD1Q8TB05 177 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 BTF3L4Q96K17 158 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 FAM173AQ9BQD7 235 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 ALG1L2C9J202 215 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 AQP8O94778 261 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF787Q6DD87 383 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 UNQ6494/PRO21346Q6UXR6 183 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 TVP23CQ96ET8 276 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
CACNB1-206ENST00000539338 TUBAL3A6NHL2 446 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 APOA2P02652 100 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 OR10J4P0C629 311 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 ASCL1P50553 236 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF75AQ96N20 296 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 H0Y8G0 127 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 GNB2P62879 340 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 RAB35Q15286 201 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 ASB13Q8WXK3 278 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 EXTL1Q92935 676 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 TMPRSS13Q9BYE2 586 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 SLC17A5Q9NRA2 495 aa12.96□□□□□ -0.34
CACNB1-206ENST00000539338 MRM2Q9UI43 246 aaKnown RBP12.96□□□□□ -0.34
CACNB1-206ENST00000539338 TRGV5A0A0B4J1U4 118 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 HOXC4P09017 264 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 IL3RAP26951 378 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 HLXQ14774 488 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 C1QL3Q5VWW1 255 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 DMKNQ6E0U4 476 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 CISD2Q8N5K1 135 aaKnown RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 RHOFQ9HBH0 211 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 PRSS44E7EML9 344 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 M0R1B8 84 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 EML2O95834 649 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 GZMMP51124 257 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 MLF1P58340 268 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 CD226Q15762 336 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 ANKRD37Q7Z713 158 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 ST6GAL2Q96JF0 529 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 MIXL1Q9H2W2 232 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 ERRFI1Q9UJM3 462 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 SLC22A20A6NK97 555 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 B4E171 279 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 HIST1H1DP16402 221 aaKnown RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 TSPAN7P41732 249 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 C4orf17Q53FE4 359 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 ZAR1Q86SH2 424 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 MCHR2Q969V1 340 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 PLA2G3Q9NZ20 509 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 HOXD4P09016 255 aaPredicted RBP12.95□□□□□ -0.34
CACNB1-206ENST00000539338 FPR2P25090 351 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 OR3A4PP47883 348 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 GSK3AP49840 483 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 PMP22Q01453 160 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 CDC20BQ86Y33 519 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 ADPRHL1Q8NDY3 354 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 CMTM2Q8TAZ6 248 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 HGDQ93099 445 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 AKR1E2Q96JD6 320 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 DHRS9Q9BPW9 319 aa12.95□□□□□ -0.34
CACNB1-206ENST00000539338 A0A1W2PPV9 198 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 K7EQS6 105 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 HRKO00198 91 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 PLPP3O14495 311 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 CNIH1O95406 144 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 PSG6Q00889 435 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 PLA1AQ53H76 456 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 OR5M8Q8NGP6 311 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 EIF4EBP2Q13542 120 aaPredicted RBP12.94□□□□□ -0.34
CACNB1-206ENST00000539338 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 PTP4A1Q93096 173 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 CNTD2Q9H8S5 307 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 TERTO14746 1132 aaKnown RBP12.94□□□□□ -0.34
CACNB1-206ENST00000539338 FUT3P21217 361 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 DHODHQ02127 395 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 ZNF816Q0VGE8 651 aaPredicted RBP12.94□□□□□ -0.34
CACNB1-206ENST00000539338 ALKBH6Q3KRA9 238 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 C6orf201Q7Z4U5 140 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 SLC38A6Q8IZM9 456 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 ZDHHC22Q8N966 263 aa12.94□□□□□ -0.34
CACNB1-206ENST00000539338 OR8U1Q8NH10 309 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms