RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CNPY3Q9BT09 278 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 BBS2Q9BXC9 721 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 NSRP1Q9H0G5 558 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 C1orf198Q9H425 327 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GOLPH3Q9H4A6 298 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 PSTPIP2Q9H939 334 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SAMSN1Q9NSI8 373 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 SLC22A7Q9Y694 548 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 COL4A5P29400 1685 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 CUL7Q14999 1698 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 TNRC6CQ9HCJ0 1690 aaKnown RBP0.69□□□□□ -2.3
HIF1A-204ENST00000539097 MYH10P35580 1976 aa0.69□□□□□ -2.3
HIF1A-204ENST00000539097 GRIN2AQ12879 1464 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NUP205Q92621 2012 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ABCA5Q8WWZ7 1642 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 LAMB1P07942 1786 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ROCK1Q13464 1354 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 IGHV3OR15-7A0A075B7D8 119 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 WI2-2373I1.2A0A1W2PRP0 233 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MGAT4DA6NG13 374 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA6L10A6NI86 522 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF726A6NNF4 738 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CD300LBA8K4G0 201 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GOLGA6L19H0YKK7 550 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CDIPTO14735 213 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PHOX2AO14813 284 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 AGPAT2O15120 278 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SNAI2O43623 268 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CLDN11O75508 207 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SCO1O75880 301 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SLC25A14O95258 325 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MPZL1O95297 269 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 UTS2O95399 124 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 HIST1H1CP16403 213 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CD36P16671 472 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GSTM3P21266 225 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CFL1P23528 166 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PAX6P26367 422 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TSPOP30536 169 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 GCKP35557 465 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CD79BP40259 229 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SLC1A2P43004 574 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 FGF8P55075 233 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 SNAP25P60880 206 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CYP24A1Q07973 514 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 IFFO1Q0D2I5 559 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 FAM53BQ14153 422 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PON2Q15165 354 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CEACAM21Q3KPI0 293 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PPM1LQ5SGD2 360 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 MARC1Q5VT66 337 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM42Q69YG0 159 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF774Q6NX45 483 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ITPRIPQ8IWB1 547 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF433Q8N7K0 673 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR2L5Q8NG80 312 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR5D18Q8NGL1 313 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR51A7Q8NH64 312 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR10J5Q8NHC4 309 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZFP90Q8TF47 636 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM239Q8WW34 195 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TMBIM1Q969X1 311 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 DNAJC19Q96DA6 116 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNF799Q96GE5 643 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TMEM101Q96IK0 257 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TRNT1Q96Q11 434 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CTRCQ99895 268 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 C12orf10Q9HB07 376 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ABCB10Q9NRK6 738 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ZNRD1Q9P1U0 126 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NYAP2Q9P242 653 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PSMC3IPQ9P2W1 217 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR12D3Q9UGF7 316 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 KIF26AQ9ULI4 1882 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NBPF19A0A087WUL8 3843 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 KIAA1109Q2LD37 5005 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 RFX7Q2KHR2 1363 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ANKRD17O75179 2603 aaKnown RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PKD1L3Q7Z443 1732 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 A0A0J9YXV3 536 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 C1orf232A0A0U1RR37 186 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ANKRD20A5PA0PJZ0 165 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 HIDE1A8MVS5 230 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CENPBD1B2RD01 187 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 LINC01619G3V211 115 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 H3BN98 237 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 DNASE2O00115 360 aaPredicted RBP0.68□□□□□ -2.3
HIF1A-204ENST00000539097 HAT1O14929 419 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 PPP1R2P9O14990 202 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 ALOX12BO75342 701 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 OR4Q2P0C623 313 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NBEAP1P0C6P0 100 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 KLK2P20151 261 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CD82P27701 267 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 CEACAM3P40198 252 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 UBE2E1P51965 193 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 FOXA1P55317 472 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 NAB1Q13506 487 aa0.68□□□□□ -2.3
HIF1A-204ENST00000539097 DMC1Q14565 340 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms