RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GJC3Q8NFK1 279 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 KCNE4Q8WWG9 221 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 PIK3IP1Q96FE7 263 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 ZNF416Q9BWM5 594 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 FAM117AQ9C073 453 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 NELFAQ9H3P2 528 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 SLC39A1Q9NY26 324 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 CSAG2Q9Y5P2 127 aa12.76□□□□□ -0.37
CDCA3-207ENST00000538862 FOXI3A8MTJ6 420 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-207ENST00000538862 KLK10O43240 276 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 FGF16O43320 207 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 ANOS1P23352 680 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 PTGFRP43088 359 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 TAS2R46P59540 309 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 TRA2AQ13595 282 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDCA3-207ENST00000538862 ARFRP1Q13795 201 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 TGIF1Q15583 401 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 KISS1Q15726 138 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 SGCAQ16586 387 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 Q6ZSR3 168 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 FOXL2NBQ6ZUU3 175 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 ARMC10Q8N2F6 343 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 AGBL5Q8NDL9 886 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 CCDC54Q8NEL0 328 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 OR51T1Q8NGJ9 327 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 MARC2Q969Z3 335 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 WDR54Q9H977 334 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 FLVCR1Q9Y5Y0 555 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 V9GYS6 101 aa12.75□□□□□ -0.37
CDCA3-207ENST00000538862 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 A0A1W2PP11 408 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 CA11O75493 328 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 VAMP5O95183 116 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 LYL1P12980 280 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
CDCA3-207ENST00000538862 PGAM2P15259 253 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 AMY2BP19961 511 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 CSNK1A1P48729 337 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 NPY4RP50391 375 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 HIST1H3AP68431 136 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 HIST2H3PS2Q5TEC6 136 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 HIST2H3AQ71DI3 136 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 BPIFCQ8NFQ6 507 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 PP6455Q8WZ26 134 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 DCUN1D4Q92564 292 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 ZNF160Q9HCG1 818 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 NXT1Q9UKK6 140 aaKnown RBP12.74□□□□□ -0.37
CDCA3-207ENST00000538862 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 NCOA6Q14686 2063 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-207ENST00000538862 IGSF10Q6WRI0 2623 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 ATP6V1G2-DDX39BF2Z307 99 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 EIF1BO60739 113 aaKnown RBP12.74□□□□□ -0.37
CDCA3-207ENST00000538862 DHRS3O75911 302 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 APOC1P02654 83 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 KLK2P20151 261 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 OR3A2P47893 321 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 SRSF6Q13247 344 aaKnown RBP12.74□□□□□ -0.37
CDCA3-207ENST00000538862 PCOLCEQ15113 449 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 PPA1Q15181 289 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 GFOD2Q3B7J2 385 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 RTL6Q6ICC9 239 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 CRIP3Q6Q6R5 217 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 CLEC18BQ6UXF7 455 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 SLC16A14Q7RTX9 510 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 SLC30A7Q8NEW0 376 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 OR52H1Q8NGJ2 320 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 LYZL4Q96KX0 146 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 RTBDNQ9BSG5 229 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-207ENST00000538862 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 ZC4H2Q9NQZ6 224 aa12.74□□□□□ -0.37
CDCA3-207ENST00000538862 SERPINE3A8MV23 424 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 E9PLN8 166 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 MC2RQ01718 297 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 CLN3Q13286 438 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 SURF2Q15527 256 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-207ENST00000538862 PRAMEF20Q5VT98 475 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 AADACL3Q5VUY0 350 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 OPN5Q6U736 354 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 UNQ6126/PRO20091Q6UXV3 157 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 BAP18Q8IXM2 172 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 LINC00518Q8N0U6 118 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 LRRC46Q96FV0 321 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 TMEM100Q9NV29 134 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 EML6Q6ZMW3 1958 aa12.73□□□□□ -0.37
CDCA3-207ENST00000538862 NUDT19A8MXV4 375 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 TOR1AO14656 332 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 FGF5P12034 268 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 ICAM2P13598 275 aa12.72□□□□□ -0.37
CDCA3-207ENST00000538862 OTX1P32242 354 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
CDCA3-207ENST00000538862 SCRN3Q0VDG4 424 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms