RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
CD4-208ENST00000538827 IGHV3-64DA0A0J9YX35 117 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 OR5B21A6NL26 309 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 MLNRO43193 412 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 SPRY3O43610 288 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 CLPXO76031 633 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 ALX3O95076 343 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 PAHP00439 452 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 THBS2P35442 1172 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 MMP15P51511 669 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 GNG3P63215 75 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 TESK1Q15569 626 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 MOGQ16653 247 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 Q6ZR03 302 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 FBXL14Q8N1E6 418 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 OR4D6Q8NGJ1 314 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 OR13G1Q8NGZ3 307 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 OR5P3Q8WZ94 311 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 ITPKCQ96DU7 683 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 ELMOD3Q96FG2 381 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 CEP19Q96LK0 163 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 UQCC2Q9BRT2 126 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 TMEM204Q9BSN7 226 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 SLC22A4Q9H015 551 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 ELL3Q9HB65 397 aaPredicted RBP12.05□□□□□ -0.48
CD4-208ENST00000538827 NKIRAS2Q9NYR9 191 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 ING4Q9UNL4 249 aa12.05□□□□□ -0.48
CD4-208ENST00000538827 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 A6NNC1 897 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 F5H5P2 479 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 M0R233 179 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 SPRY1O43609 319 aaPredicted RBP12.04□□□□□ -0.48
CD4-208ENST00000538827 TMEM225BP0DP42 221 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
CD4-208ENST00000538827 SERPINF1P36955 418 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 ZNF81P51508 661 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 C1orf100Q5SVJ3 147 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 ANGPTL5Q86XS5 388 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 OR51D1Q8NGF3 324 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 OR5A2Q8NGI9 324 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 OR5H6Q8NGV6 325 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 ACOT12Q8WYK0 555 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 FBXW5Q969U6 566 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
CD4-208ENST00000538827 S100A13Q99584 98 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 DHRS9Q9BPW9 319 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 MMP27Q9H306 513 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 UBTD1Q9HAC8 227 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 ABRACLQ9P1F3 81 aa12.04□□□□□ -0.48
CD4-208ENST00000538827 A0A075B6Q4 140 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 A6NLC8 198 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 FAM25AB3EWG3 89 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 FAM25CB3EWG5 89 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 FAM25GB3EWG6 89 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 ANGPTL7O43827 346 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 GRPP07492 148 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 CALCBP10092 127 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 NAT2P11245 290 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 COX6B1P14854 86 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 S100A5P33763 92 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 HAAOP46952 286 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 MZT1Q08AG7 82 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 HAGHLQ6PII5 290 aaPredicted RBP12.03□□□□□ -0.48
CD4-208ENST00000538827 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 KRT74Q7RTS7 529 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 CDH26Q8IXH8 852 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 BATF2Q8N1L9 274 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 SAMD12Q8N8I0 201 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 LILRB1Q8NHL6 650 aaPredicted RBP12.03□□□□□ -0.48
CD4-208ENST00000538827 FAM3DQ96BQ1 224 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 NXF2Q9GZY0 626 aaKnown RBP12.03□□□□□ -0.48
CD4-208ENST00000538827 CYSLTR2Q9NS75 346 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 C14orf119Q9NWQ9 140 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 OR5V1Q9UGF6 321 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 PEX16Q9Y5Y5 336 aa12.03□□□□□ -0.48
CD4-208ENST00000538827 LOC100289279A0A1B0GTE1 492 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 LRP5LA4QPB2 252 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 TMEM210A6NLX4 147 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 J3QT63 122 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 CTDSP2O14595 271 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 TPD52L2O43399 206 aaKnown RBP12.02□□□□□ -0.49
CD4-208ENST00000538827 HPGDSO60760 199 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 BPNT1O95861 308 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 CYB5AP00167 134 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 ARSBP15848 533 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 SERPINA2P20848 420 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 TNFSF4P23510 183 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 PTGFRP43088 359 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 BMXP51813 675 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 ZP1P60852 638 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 SNRPD2P62316 118 aaKnown RBP12.02□□□□□ -0.49
CD4-208ENST00000538827 MADCAM1Q13477 382 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 RIN1Q13671 783 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 DAZAP2Q15038 168 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms