RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 IGKV1-8A0A0C4DH67 115 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 KIR2DL5BA0A0G2JN68 375 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 KIR2DL5BA0A0G2JPC4 375 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 A0A1B0GVT2 93 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 A0A1W2PPQ1 181 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 IGLON5A6NGN9 336 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 ZNF732B4DXR9 585 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 LEFTY2O00292 366 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CYB5BO43169 146 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 GPR75O95800 540 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 MT-ATP6P00846 226 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 TRGC2P03986 189 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 SLC35G6P0C7Q6 338 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 FOSL2P15408 326 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CD200P41217 278 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 OR3A2P47893 321 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 GABRA4P48169 554 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 RGS19P49795 217 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CASP6P55212 293 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CTXN1P60606 82 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 S100A10P60903 97 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 FKBP1BP68106 108 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 SRPXP78539 464 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 NTHL1P78549 312 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 SSPNQ14714 243 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 TCEA2Q15560 299 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 ANKRD55Q3KP44 614 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 ASPHD2Q6ICH7 369 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 KIRREL2Q6UWL6 708 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CXCL17Q6UXB2 119 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 LCNL1Q6ZST4 164 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 DPY19L4Q7Z388 723 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CENPVQ7Z7K6 275 aaPredicted RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 ADIPOR2Q86V24 386 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 FAM219AQ8IW50 185 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 KIR2DL5AQ8N109 375 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 PRR18Q8N4B5 295 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 JAGN1Q8N5M9 183 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 LINC01555Q8NAE3 123 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 CHST4Q8NCG5 386 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 SLC26A10Q8NG04 563 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 OR2L3Q8NG85 312 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 OR4S1Q8NGB4 309 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 OR52N4Q8NGI2 321 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 OR10AC1Q8NH08 325 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 GRHL3Q8TE85 626 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 ABHD5Q8WTS1 349 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 DNASE2BQ8WZ79 361 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 FRZBQ92765 325 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 RASD2Q96D21 266 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 TM4SF19Q96DZ7 209 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 SMAD5Q99717 465 aaKnown RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 C20orf144Q9BQM9 153 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 URM1Q9BTM9 101 aaKnown RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 PRO1933Q9H354 126 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 TCEAL2Q9H3H9 227 aaPredicted RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 KIR3DX1Q9H7L2 352 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 Q9N2J8 555 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 MMP25Q9NPA2 562 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 ASCL3Q9NQ33 180 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 GPR84Q9NQS5 396 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 SPHK2Q9NRA0 654 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 P4HTMQ9NXG6 502 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 RNF181Q9P0P0 153 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 APOBEC3BQ9UH17 382 aaKnown RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 DAPP1Q9UN19 280 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 PTRH2Q9Y3E5 179 aaKnown RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 OR1A2Q9Y585 309 aa5.9□□□□□ -1.46
USP28-207ENST00000538475 PUS1Q9Y606 427 aaKnown RBP eCLIP5.9□□□□□ -1.46
USP28-207ENST00000538475 DOCK8Q8NF50 2099 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 MYO7BQ6PIF6 2116 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 MUC22E2RYF6 1773 aaPredicted RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 TRBV23OR9-2A0A075B6M9 112 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 A0A0G2JN53 185 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CENPVL1A0A0U1RR11 272 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 A0A1B0GU03 582 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 A0A1W2PN81 502 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 A6NIZ1 184 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 NPIPB13A6NJU9 1138 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 SERPINE3A8MV23 424 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 A8MVM7 634 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 FAM171A2A8MVW0 826 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 NPIPB4C9JG80 1138 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 STMND1H3BQB6 276 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 XKRYO14609 159 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 ST8SIA3O43173 380 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 NME2P1O60361 137 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 TSPAN2O60636 221 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 PITX3O75364 302 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 SRSF10O75494 262 aaKnown RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 SCAF4O95104 1147 aaKnown RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 NSA2O95478 260 aaKnown RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 APBB3O95704 486 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 IGHMP01871 453 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 AMBPP02760 352 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 CXCL1P09341 107 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 SLC35E2P0CK97 266 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 TMEM225BP0DP42 221 aa5.89□□□□□ -1.47
USP28-207ENST00000538475 HIST1H1DP16402 221 aaKnown RBP5.89□□□□□ -1.47
USP28-207ENST00000538475 ZNF25P17030 456 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms