RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 C17orf107Q6ZR85 190 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 MDP1Q86V88 176 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 MSRB3Q8IXL7 192 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 MARCH1Q8TCQ1 289 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 FGF20Q9NP95 211 aaPredicted RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 SIRT5Q9NXA8 310 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 SIPA1L1O43166 1804 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 ZNF785A8K8V0 405 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 FCGR3BO75015 233 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CYC1P08574 325 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CALCRP30988 508 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 UBE2MP61081 183 aaKnown RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 SKP2Q13309 424 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CDCP2Q5VXM1 449 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 TMEM251Q8N6I4 163 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CORO2AQ92828 525 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 SPSB1Q96BD6 273 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 BSCL2Q96G97 398 aaPredicted RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 FCRL1Q96LA6 429 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 SLC25A21Q9BQT8 299 aaPredicted RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 SF3B5Q9BWJ5 86 aaKnown RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 AUNIPQ9H7T9 357 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 SCPEP1Q9HB40 452 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 BARX1Q9HBU1 254 aaPredicted RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 PSENENQ9NZ42 101 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 hADV38S2A0JD32 116 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 PRSS44E7EML9 344 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 F2RL2O00254 374 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 LRP3O75074 770 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CD1EP15812 388 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 PPP3CBP16298 524 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 FUT3P21217 361 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CDK5Q00535 292 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 MPPED2Q15777 294 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 C12orf73Q69YU5 71 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 ATG4DQ86TL0 474 aaPredicted RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 OR8B12Q8NGG6 310 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 SLC25A40Q8TBP6 338 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 DUS3LQ96G46 650 aaKnown RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 FAAP24Q9BTP7 215 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 MAGT1Q9H0U3 335 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 C12orf10Q9HB07 376 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CYSLTR2Q9NS75 346 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 IL20Q9NYY1 176 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 TINAGQ9UJW2 476 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CSAG2Q9Y5P2 127 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 PSME4Q14997 1843 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 ST8SIA5O15466 376 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 TRAF3IP2O43734 574 aaPredicted RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 BCL3P20749 454 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CLDN20P56880 219 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 TAGLNQ01995 201 aaKnown RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 MESTQ5EB52 335 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 KCNIP4Q6PIL6 250 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 MAMSTRQ6ZN01 415 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CCDC28AQ8IWP9 274 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 OR2G3Q8NGZ4 309 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 POM121L2Q96KW2 1035 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 DDOQ99489 341 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CHODLQ9H9P2 273 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 ADGRL4Q9HBW9 690 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 RBFOX1Q9NWB1 397 aaKnown RBP4.75□□□□□ -1.65
LRP6-203ENST00000538239 TRAPPC4Q9Y296 219 aa4.75□□□□□ -1.65
LRP6-203ENST00000538239 CD3DP04234 171 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 HPNP05981 417 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 CTSBP07858 339 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ADRA2AP08913 450 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 UBE2G1P62253 170 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 SNRPNP63162 240 aaKnown RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 FCN2Q15485 313 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 Q3ZCU0 254 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 SPINK9Q5DT21 86 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 SLC38A6Q8IZM9 456 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR8U1Q8NH10 309 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PTP4A1Q93096 173 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 IL17BQ9UHF5 180 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TMEM272A0A1B0GTI8 110 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 CDC42EP2O14613 210 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 COX7A2P2O60397 106 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ZNF17P17021 662 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 IL11P20809 199 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 LIMK1P53667 647 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 UBE2G2P60604 165 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 KLRB1Q12918 225 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 AARDQ4LEZ3 155 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR10P1Q8NGE3 313 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR2H1Q9GZK4 316 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TIMM9Q9Y5J7 89 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 ARID2Q68CP9 1835 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 TMEM200CA6NKL6 621 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 DFFBO76075 338 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FAM87AP0C7U9 286 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 SLC25A6P12236 298 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 MAGEB1P43366 347 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 PSMB3P49720 205 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 RAB5BP61020 215 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 FLI1Q01543 452 aaPredicted RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 RELAQ04206 551 aa4.74□□□□□ -1.65
LRP6-203ENST00000538239 EIF4EBP2Q13542 120 aaPredicted RBP4.74□□□□□ -1.65
LRP6-203ENST00000538239 OR4S1Q8NGB4 309 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms