RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 AADACL4Q5VUY2 407 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 BRD3OSQ6XYD6 125 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 TMEM123Q8N131 208 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 UBASH3BQ8TF42 649 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 WACQ9BTA9 647 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 DCTN5Q9BTE1 182 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 FUNDC2Q9BWH2 189 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 TMEM59Q9BXS4 323 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 DIABLOQ9NR28 239 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 IL36RNQ9UBH0 155 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 SLC23A1Q9UHI7 598 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 PSORS1C1Q9UIG5 152 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 DYSFO75923 2080 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 DNPH1O43598 174 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 CST2P09228 141 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 LIMS3P0CW19 117 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 LIMS4P0CW20 117 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 RPL5P46777 297 aaKnown RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 PSMA6P60900 246 aaKnown RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 GNG3P63215 75 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 ABLIM2Q6H8Q1 611 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 WFDC11Q8NEX6 87 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 TAF15Q92804 592 aaKnown RBP eCLIP6.21□□□□□ -1.42
MSH6-209ENST00000538136 URM1Q9BTM9 101 aaKnown RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 MS4A7Q9GZW8 240 aaPredicted RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 CST11Q9H112 138 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 C7orf69Q9H7B7 122 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 EVA1AQ9H8M9 152 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 C12orf10Q9HB07 376 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 GP6Q9HCN6 339 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 ELOVL5Q9NYP7 299 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 KCNIP1Q9NZI2 227 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 ZNF230Q9UIE0 474 aaPredicted RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 NCBP2LA6PVI3 153 aaKnown RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 MCRIP1C9JLW8 97 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TOR1AO14656 332 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 MPPED1O15442 326 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 XRCC2O43543 280 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ACTL6BO94805 426 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 H3F3AP84243 136 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CBX3Q13185 183 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 GALEQ14376 348 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 FAM189A2Q15884 450 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PIGYQ3MUY2 71 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 UBE2UQ5VVX9 321 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 DOK3Q7L591 496 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PRSS45Q7RTY3 260 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CCDC54Q8NEL0 328 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 OR6Q1Q8NGQ2 317 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ACOT13Q9NPJ3 140 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ETAA1Q9NY74 926 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 FRRS1LQ9P0K9 344 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CYB5R1Q9UHQ9 305 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 DOCK11Q5JSL3 2073 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 DCHS2Q6V1P9 2916 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PPIAL4EA0A075B759 164 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 DPPA5A6NC42 116 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 NKX6-3A6NJ46 265 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PPIAL4DF5H284 164 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 KLF4O43474 513 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 OPN1MWP04001 364 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CRHP06850 196 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PPIAL4FP0DN26 164 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 OPN1MW2P0DN77 364 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 OPN1MW3P0DN78 364 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PI3P19957 117 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 MAPK3P27361 379 aaPredicted RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 BLMHQ13867 455 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 Q499Y3 187 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CDNFQ49AH0 187 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TMEM69Q5SWH9 247 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ZNF770Q6IQ21 691 aaPredicted RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 RPL22L1Q6P5R6 122 aaKnown RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 ZNF773Q6PK81 442 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 FAM122BQ7Z309 247 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PAPD5Q8NDF8 572 aaKnown RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 PPP1R35Q8TAP8 253 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 SORCS2Q96PQ0 1159 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CMSS1Q9BQ75 279 aaKnown RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 METTL9Q9H1A3 318 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 POFUT1Q9H488 388 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 HMG20AQ9NP66 347 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 EXTL2Q9UBQ6 330 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 KIF25Q9UIL4 384 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 LRRC42Q9Y546 428 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 SLC25A15Q9Y619 301 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 SIRT4Q9Y6E7 314 aaPredicted RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 PLXNB1O43157 2135 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 MEIOCA2RUB1 952 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 FABP12A6NFH5 140 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TNFSF12O43508 249 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 GMDSO60547 372 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 AMY2BP19961 511 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 ACKR3P25106 362 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 CEACAM8P31997 349 aaPredicted RBP6.2□□□□□ -1.42
MSH6-209ENST00000538136 WNT5AP41221 380 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 NPBWR2P48146 333 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 TAS2R43P59537 309 aa6.2□□□□□ -1.42
MSH6-209ENST00000538136 KISS1Q15726 138 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms