RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 FN3KRPQ9HA64 309 aa7.61□□□□□ -1.19
UBE3B-208ENST00000538070 CADP27708 2225 aa7.61□□□□□ -1.19
UBE3B-208ENST00000538070 MEX3AA1L020 520 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 C5orf49A4QMS7 147 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 GJE1A6NN92 205 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 H3BUI4 141 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 GEMIN2O14893 280 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 RAC3P60763 192 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 PSG4Q00888 419 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 RSPO1Q2MKA7 263 aaPredicted RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 PABPC1L2AQ5JQF8 200 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 C11orf87Q6NUJ2 197 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 SLC25A42Q86VD7 318 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 SKA3Q8IX90 412 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 MRGPRFQ96AM1 343 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 CPNE2Q96FN4 548 aaPredicted RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 CMSS1Q9BQ75 279 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 PECRQ9BY49 303 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 PRO3102Q9H379 93 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM231Q9H6L2 316 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 C14orf166Q9Y224 244 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 MGAQ8IWI9 3026 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM265A0A087WTH1 108 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 A0A087WZY1 265 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 LOC102723996A0A087X1L8 192 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 LINC00862A6NCI5 91 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 FBXO24O75426 580 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 FARS2O95363 451 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 NRASP01111 189 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 RRASP10301 218 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 ZBTB25P24278 435 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 QRFPP83859 136 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 ZNF92Q03936 586 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 RIPPLY1Q0D2K3 151 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 CLEC18BQ6UXF7 455 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 MEX3BQ6ZN04 569 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 PEG10Q86TG7 708 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 CDH26Q8IXH8 852 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 OR13G1Q8NGZ3 307 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 OR51F2Q8NH61 342 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 SCARB1Q8WTV0 552 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TMED6Q8WW62 240 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 MCTS1Q9ULC4 181 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 IGLV3-32A0A0A0MS00 114 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 LOC390937A0A1W2PQ73 354 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 DHRS7CA6NNS2 312 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM127O75204 238 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TNFSF15O95150 251 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 CD63P08962 238 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 RBMXP38159 391 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 ARF1P84077 181 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 H3F3AP84243 136 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TUSC1Q2TAM9 212 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 ABCA11PQ4W5N1 156 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 SPIN3Q5JUX0 258 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 SLC25A26Q70HW3 274 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 ZNF100Q8IYN0 542 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM123Q8N131 208 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 STPG2Q8N412 459 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 PRR18Q8N4B5 295 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 NABP1Q96AH0 204 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 FAM122AQ96E09 287 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 UTP23Q9BRU9 249 aaKnown RBP7.6□□□□□ -1.19
UBE3B-208ENST00000538070 C5orf66Q9H5L9 145 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 GPR160Q9UJ42 338 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 CPAMD8Q8IZJ3 1885 aa7.6□□□□□ -1.19
UBE3B-208ENST00000538070 MED19A0JLT2 244 aaPredicted RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 BET1O15155 118 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 YKT6O15498 198 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 CD74P04233 296 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 CPT2P23786 658 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SRD5A2P31213 254 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 LSM6P62312 80 aaKnown RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 RPS27AP62979 156 aaKnown RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 NHLRC3Q5JS37 347 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ZNF585AQ6P3V2 769 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SLC51BQ86UW2 128 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 OR5L1Q8NGL2 311 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ANGPTL6Q8NI99 470 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 METTL9Q9H1A3 318 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ACACAQ13085 2346 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 A0A0A6YYH2 397 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 A6NJ64 397 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ARGFXA6NJG6 315 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 NPIPB13A6NJU9 1138 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 NPIPB4C9JG80 1138 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 DKK1O94907 266 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ICAM2P13598 275 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 AGTR1P30556 359 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 NOVA1P51513 510 aaKnown RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 OR1C1Q15619 314 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ANKRD55Q3KP44 614 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 TRAF4Q9BUZ4 470 aaPredicted RBP7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SLC7A10Q9NS82 523 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SLC7A11Q9UPY5 501 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 ST3GAL6Q9Y274 331 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 C9orf172C9J069 976 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 SYNGR4O95473 234 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 PSMB6P28072 239 aa7.59□□□□□ -1.19
UBE3B-208ENST00000538070 RBP2P50120 134 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms