RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 NPIPA3F8WFD2 350 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 IFNA6P05013 189 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 FAHP16930 419 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 PI3P19957 117 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 CCL1P22362 96 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 NFYBP25208 207 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 OTX2P32243 289 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 ZNF528Q3MIS6 628 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 PEAR1Q5VY43 1037 aaPredicted RBP11.27□□□□□ -0.6
TRIM25-202ENST00000537230 TMEM200AQ86VY9 491 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 SPAG16Q8N0X2 631 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 TMEM105Q8N8V8 129 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 SSC4DQ8WTU2 575 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.6
TRIM25-202ENST00000537230 NTNG2Q96CW9 530 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 FBXO17Q96EF6 278 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 GPER1Q99527 375 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 CMSS1Q9BQ75 279 aaKnown RBP11.27□□□□□ -0.6
TRIM25-202ENST00000537230 NELFAQ9H3P2 528 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 CYTL1Q9NRR1 136 aa11.27□□□□□ -0.6
TRIM25-202ENST00000537230 COL27A1Q8IZC6 1860 aaPredicted RBP11.27□□□□□ -0.61
TRIM25-202ENST00000537230 TEX13DA0A0J9YY54 714 aaPredicted RBP11.27□□□□□ -0.61
TRIM25-202ENST00000537230 F8VVB4 439 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 F8VWA3 439 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
TRIM25-202ENST00000537230 ADAP1O75689 374 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 CYC1P08574 325 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 CD79AP11912 226 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.27□□□□□ -0.61
TRIM25-202ENST00000537230 ZFP82Q8N141 532 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 STOML3Q8TAV4 291 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 TMEM54Q969K7 222 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 PGAM5Q96HS1 289 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 OR2S2Q9NQN1 319 aa11.27□□□□□ -0.61
TRIM25-202ENST00000537230 A0A087WZY1 265 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 CRTAPO75718 401 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-202ENST00000537230 FOLR3P41439 243 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 UBE2V2Q15819 145 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 MICBQ29980 383 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-202ENST00000537230 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 RNF141Q8WVD5 230 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 TMEM100Q9NV29 134 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 DCAF16Q9NXF7 216 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 DHHO43323 396 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 PATE4P0C8F1 98 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 SPP1P10451 314 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 BTF3P20290 206 aaKnown RBP11.26□□□□□ -0.61
TRIM25-202ENST00000537230 KCNJ3P48549 501 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 SLC9A3R2Q15599 337 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 SNAI3Q3KNW1 292 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 C10orf128Q5T292 105 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 DOK3Q7L591 496 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 TIPARPQ7Z3E1 657 aaKnown RBP11.26□□□□□ -0.61
TRIM25-202ENST00000537230 PPP1R32Q7Z5V6 425 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 MAFIPQ8WZ33 124 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 RAB3CQ96E17 227 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 CNTNAP3BQ96NU0 1288 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 TMEM59Q9BXS4 323 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 FBLN5Q9UBX5 448 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-202ENST00000537230 DMXL1Q9Y485 3027 aa11.26□□□□□ -0.61
TRIM25-202ENST00000537230 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 PRSS44E7EML9 344 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 FARS2O95363 451 aaKnown RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 CER1O95813 267 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 CRYBA1P05813 215 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 FAM157CP0CG43 387 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 RFC3P40938 356 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 LSM6P62312 80 aaKnown RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 GRB2P62993 217 aaKnown RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 TRA2AQ13595 282 aaKnown RBP eCLIP11.25□□□□□ -0.611e-7■■■□□ 15.8
TRIM25-202ENST00000537230 KISS1Q15726 138 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 PGAP1Q75T13 922 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 C1orf210Q8IVY1 113 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 OR5AC2Q9NZP5 309 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 CARHSP1Q9Y2V2 147 aaKnown RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 HIST1H1DP16402 221 aaKnown RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 MPZP25189 248 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 FKBP2P26885 142 aaKnown RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 NPY4RP50391 375 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 MST1LQ2TV78 715 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 C10orf91Q5T1B1 145 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 FAHD2BQ6P2I3 314 aaPredicted RBP11.25□□□□□ -0.61
TRIM25-202ENST00000537230 ZNF585AQ6P3V2 769 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 GJC3Q8NFK1 279 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 OR4K15Q8NH41 348 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 OR2AE1Q8NHA4 323 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 FAHD2AQ96GK7 314 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 TRBV6-7A0A0A0MS04 114 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 STMND1H3BQB6 276 aa11.25□□□□□ -0.61
TRIM25-202ENST00000537230 EIF1BO60739 113 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms