RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 OR6K3Q8NGY3 331 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 OR13G1Q8NGZ3 307 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 MARCH1Q8TCQ1 289 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 SLX1AQ9BQ83 275 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 SLC6A15Q9H2J7 730 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 C5orf66Q9H5L9 145 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 SLC7A10Q9NS82 523 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 MED9Q9NWA0 146 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 PARPBPQ9NWS1 579 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 SHPKQ9UHJ6 478 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 ZNF230Q9UIE0 474 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 MYO7BQ6PIF6 2116 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 FXYD6-FXYD2A0A087WZ82 144 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 SP1P08047 785 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 AGTR1P30556 359 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 CAMK2BQ13554 666 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 SURF2Q15527 256 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 TMEM128Q5BJH2 165 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 PXT1Q8NFP0 134 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 OR5H2Q8NGV7 314 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 FER1L6-AS2Q96M78 137 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 ACKR4Q9NPB9 350 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 KLF13Q9Y2Y9 288 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 NOP16Q9Y3C1 178 aaKnown RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 ARHGAP21Q5T5U3 1957 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 FREM2Q5SZK8 3169 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 MRPL33O75394 65 aaKnown RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 RP2O75695 350 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 FARS2O95363 451 aaKnown RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 RRASP10301 218 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 MTCP1P56278 107 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 IL13RA1P78552 427 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 ZNF92Q03936 586 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 PABPC1L2AQ5JQF8 200 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 THOC7Q6I9Y2 204 aaKnown RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 OVCH2Q7RTZ1 564 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 ZFP62Q8NB50 900 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 EMG1Q92979 244 aaKnown RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 RTBDNQ9BSG5 229 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 METTL9Q9H1A3 318 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 DECR2Q9NUI1 292 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 MCTS1Q9ULC4 181 aaKnown RBP8.08□□□□□ -1.12
UBE3B-207ENST00000537063 TNFSF18Q9UNG2 199 aa8.08□□□□□ -1.12
UBE3B-207ENST00000537063 OR5H14A6NHG9 310 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 AMY2BP19961 511 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 RFC3P40938 356 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 RBP2P50120 134 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SNU13P55769 128 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 P2RX3P56373 397 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 OR5AP2Q8NGF4 316 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 S100A13Q99584 98 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 PLA2G3Q9NZ20 509 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 FAM166BA8MTA8 275 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SYNGR4O95473 234 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 ACTL6AO96019 429 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 NRASP01111 189 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 LIPCP11150 499 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 RPS2P15880 293 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 MEOX1P50221 254 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 ARF1P84077 181 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 ARFRP1Q13795 201 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 C11orf87Q6NUJ2 197 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SUMF1Q8NBK3 374 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 Q8NFD4 153 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 IGKV1-12A0A0C4DH73 117 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 ZNF816-ZNF321PA0A0X1KG74 233 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SFT2D2O95562 160 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 IGKV1D-12P01611 117 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 CD82P27701 267 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 CHATP28329 748 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 FUT6P51993 359 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SUPT4H1P63272 117 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 RNPS1Q15287 305 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 LIN54Q6MZP7 749 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 RPUSD3Q6P087 351 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 GSG1LQ6UXU4 331 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 TUSC5Q8IXB3 177 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 KCNRGQ8N5I3 272 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SCARB1Q8WTV0 552 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 MRPS24Q96EL2 167 aaKnown RBP8.07□□□□□ -1.12
UBE3B-207ENST00000537063 SCGB3A2Q96PL1 93 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 CITED4Q96RK1 184 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
UBE3B-207ENST00000537063 LOC100509620A0A075B734 347 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 A0A0D9SG52 128 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 ZNF587BE7ETH6 402 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 ZNF24P17028 368 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 DTYMKP23919 212 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 DAZAP2Q15038 168 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-207ENST00000537063 ZNF660Q6AZW8 331 aaPredicted RBP8.06□□□□□ -1.12
UBE3B-207ENST00000537063 LINC00696Q6ZRV3 163 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 RFPL4BQ6ZWI9 263 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 TMEM17Q86X19 198 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 NMES1Q9C002 83 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 ARL6Q9H0F7 186 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 EDARQ9UNE0 448 aa8.06□□□□□ -1.12
UBE3B-207ENST00000537063 GPR179Q6PRD1 2367 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms