RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 OR4D11Q8NGI4 311 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SPTSSAQ969W0 71 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ABHD14BQ96IU4 210 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 WDR92Q96MX6 357 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SPSB2Q99619 263 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SLC2A9Q9NRM0 540 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SIRT4Q9Y6E7 314 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 RLFQ13129 1914 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SIAH2O43255 324 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CA3P07451 260 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 BIDP55957 195 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 PRDX4Q13162 271 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 NR0B2Q15466 257 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM176BQ3YBM2 270 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 Q7L0L9 218 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GRINAQ7Z429 371 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 DTD1Q8TEA8 209 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 DYRK2Q92630 601 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 OR10A5Q9H207 317 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ASCL3Q9NQ33 180 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 PLEK2Q9NYT0 353 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CLCF1Q9UBD9 225 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 LIPGQ9Y5X9 500 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CEACAM18A8MTB9 384 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 NDUFS8O00217 210 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 OR7C1O76099 320 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GSTP1P09211 210 aaKnown RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 IAPPP10997 89 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FSTP19883 344 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FBLP22087 321 aaKnown RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 RAET1LQ5VY80 246 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF595Q8IYB9 648 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 IFI44Q8TCB0 444 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 C22orf15Q8WYQ4 148 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 EMG1Q92979 244 aaKnown RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 LHX4Q969G2 390 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CCDC74AQ96AQ1 378 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TMED7Q9Y3B3 224 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TRAV36DV7A0A075B6V5 113 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 A0A1W2PN81 502 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 A8MWP6 167 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TMIGD3P0DMS9 266 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 NDUFB7P17568 137 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CHRNA7P36544 502 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 UBE2G2P60604 165 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TGIF1Q15583 401 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 EXTL1Q92935 676 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 KISS1RQ969F8 398 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ATG101Q9BSB4 218 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 NAA11Q9BSU3 229 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FKBP11Q9NYL4 201 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 NSG1A0A0A6YYJ2 146 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 FTCDNL1E5RQL4 147 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ZFPL1O95159 310 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GLRA1P23415 457 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM33P57088 247 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GABREP78334 506 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 B4GALNT1Q00973 533 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 EIF3IQ13347 325 aaKnown RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 HIKESHIQ53FT3 197 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 OR52N4Q8NGI2 321 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 MS4A6EQ96DS6 147 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SDF2Q99470 211 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 SIGLEC7Q9Y286 467 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF264O43296 627 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 CIDEAO60543 219 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 TNFRSF9Q07011 255 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 VAX1Q5SQQ9 334 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ARHGEF39Q8N4T4 335 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF808Q8N4W9 903 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 GVQW1Q8N7I0 195 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ZSCAN4Q8NAM6 433 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-213ENST00000537002 OR51H1Q8NH63 302 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 LMX1AQ8TE12 382 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 ALKBH4Q9NXW9 302 aa4.83□□□□□ -1.64
PTPRD-213ENST00000537002 H3BQ15 152 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CDC42EP2O14613 210 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CST7O76096 145 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 HSPB1P04792 205 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FPR2P25090 351 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 HOXC12P31275 282 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FAM3BP58499 235 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 PMP22Q01453 160 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 C1orf53Q5VUE5 145 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 MED25Q71SY5 747 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 C11orf42Q8N5U0 333 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FAM3CQ92520 227 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ABHD6Q9BV23 337 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SLC2A4RGQ9NR83 387 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 OR14J1Q9UGF5 321 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF346Q9UL40 294 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ZMIZ1Q9ULJ6 1067 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 LHX6Q9UPM6 363 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TRBV24-1A0A075B6N3 115 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RBFOX3A6NFN3 312 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 DLEU1O43261 78 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 MOSPD3O75425 235 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms