RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 C3orf80F5H4A9 247 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 CDIPTO14735 213 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 HOXA3O43365 443 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 MTRF1O75570 445 aaKnown RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 FCN3O75636 299 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 TNFAIP8O95379 198 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 ACAA1P09110 424 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 GABRB1P18505 474 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 GNG3P63215 75 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 CSNK2BP67870 215 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 HOXA4Q00056 320 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 MFGE8Q08431 387 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 MIDNQ504T8 468 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 SFRP4Q6FHJ7 346 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 SSX6Q7RTT6 188 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 KCTD20Q7Z5Y7 419 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 CBR4Q8N4T8 237 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 SCCPDHQ8NBX0 429 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 C19orf18Q8NEA5 215 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 OR51E1Q8TCB6 317 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 PIGCQ92535 297 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 PPP1R14AQ96A00 147 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 RNF170Q96K19 258 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 HIST1H2AAQ96QV6 131 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 NUDT16L1Q9BRJ7 211 aaKnown RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 YTHDF1Q9BYJ9 559 aaKnown RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 OR51I2Q9H344 312 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 OR52A1Q9UKL2 312 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 IKZF2Q9UKS7 526 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 ORC6Q9Y5N6 252 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 PRKDCP78527 4128 aaKnown RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 hCG_1807616A0A1W2PRN6 198 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 LOC110117498-PIK3R3F6TDL0 507 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 H0YAE9 185 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 DLGAP1O14490 977 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 ADAM20O43506 726 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 KRT8P05787 483 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 AMY2BP19961 511 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 SRSF4Q08170 494 aaKnown RBP10.29□□□□□ -0.76
PRKDC-207ENST00000536483 DEFB112Q30KQ8 113 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 STUMQ69YW2 141 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 FDX2Q6P4F2 183 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 BRD3OSQ6XYD6 125 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 PLEKHG7Q6ZR37 379 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 CATSPERDQ86XM0 798 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 OR14K1Q8NGZ2 314 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 FAM81AQ8TBF8 368 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 RORBQ92753 470 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 UBE2FQ969M7 185 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 TECTBQ96PL2 329 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 ANKRD60Q9BZ19 345 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 SMURF1Q9HCE7 757 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 TNFRSF19Q9NS68 423 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 ENPP5Q9UJA9 477 aa10.29□□□□□ -0.76
PRKDC-207ENST00000536483 EXOGQ9Y2C4 368 aaKnown RBP10.29□□□□□ -0.76
PRKDC-207ENST00000536483 SLC16A6O15403 523 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MAGEB4O15481 346 aaPredicted RBP10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MPZL2O60487 215 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 NOS1APO75052 506 aaPredicted RBP10.28□□□□□ -0.76
PRKDC-207ENST00000536483 ENTPD6O75354 484 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 GYPAP02724 150 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MMP9P14780 707 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF85Q03923 595 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 BCL2L15Q5TBC7 163 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF788Q6ZQV5 615 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 SLC36A1Q7Z2H8 476 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 KIR3DL3Q8N743 410 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 RHOXF1Q8NHV9 184 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 ANGPTL6Q8NI99 470 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 C8orf46Q8TAG6 207 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 AQP3Q92482 292 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 TFAP2CQ92754 450 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 RPL3LQ92901 407 aaKnown RBP10.28□□□□□ -0.76
PRKDC-207ENST00000536483 ZDHHC16Q969W1 377 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 C10orf35Q96D05 121 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MBOAT4Q96T53 435 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MYCBPQ99417 103 aaPredicted RBP10.28□□□□□ -0.76
PRKDC-207ENST00000536483 SLC29A1Q99808 456 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MRPS18AQ9NVS2 196 aaKnown RBP10.28□□□□□ -0.76
PRKDC-207ENST00000536483 IMPAD1Q9NX62 359 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 RASL12Q9NYN1 266 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 SLC22A13Q9Y226 551 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 PIGLQ9Y2B2 252 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 MMP24Q9Y5R2 645 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 DOCK11Q5JSL3 2073 aa10.28□□□□□ -0.76
PRKDC-207ENST00000536483 VWFP04275 2813 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 SMIM31A0A1B0GVY4 71 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 DPPA5A6NC42 116 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 FAM181BA6NEQ2 426 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 SNTNA6NMZ2 147 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF879B4DU55 563 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF732B4DXR9 585 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 DVL1O14640 695 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 KNG1P01042 644 aa10.27□□□□□ -0.77
PRKDC-207ENST00000536483 NRASP01111 189 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms