RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GJE1A6NN92 205 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 DNPH1O43598 174 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 CSTBP04080 98 aaKnown RBP14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 DBHP09172 617 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 FAM157CP0CG43 387 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 BOLLQ8N9W6 283 aaKnown RBP14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 POC1AQ8NBT0 407 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 SEMA6DQ8NFY4 1073 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 MAFIPQ8WZ33 124 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 PIGTQ969N2 578 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 JSRP1Q96MG2 331 aaPredicted RBP14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 PRR13Q9NZ81 148 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 EDARQ9UNE0 448 aa14.02□□□□□ -0.17
CHMP1A-202ENST00000535997 C9J4A7 227 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 IFNA2P01563 188 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 MTCP1P56278 107 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 PDSS1Q5T2R2 415 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 PMS2CLQ68D20 193 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF585AQ6P3V2 769 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 SULF2Q8IWU5 870 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 AGBL5Q8NDL9 886 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 TMED6Q8WW62 240 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 ARL11Q969Q4 196 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 SPSB1Q96BD6 273 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 Q96M66 194 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 DECR2Q9NUI1 292 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF701Q9NV72 531 aaPredicted RBP14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 C1orf123Q9NWV4 160 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 HPF1Q9NWY4 346 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 MSGN1A6NI15 193 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 TAAR5O14804 337 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 YKT6O15498 198 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 SERPINA5P05154 406 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 ARHGDIBP52566 201 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 RAC3P60763 192 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 RAB32Q13637 225 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF169Q14929 603 aaPredicted RBP14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 RPUSD3Q6P087 351 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 C6orf201Q7Z4U5 140 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 OR5T2Q8NGG2 359 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 OR2Y1Q8NGV0 311 aa14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 MCTS1Q9ULC4 181 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-202ENST00000535997 TMEM265A0A087WTH1 108 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 ATP6V1G2-DDX39BF2Z307 99 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 ABCD4O14678 606 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 TNFSF11O14788 317 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 SIGLEC5O15389 551 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 KNG1P01042 644 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 TMEM225BP0DP42 221 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 CRYGSP22914 178 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 HOXA6P31267 233 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 MLF1P58340 268 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 EIF5AP63241 154 aaKnown RBP14□□□□□ -0.17
CHMP1A-202ENST00000535997 SIGLEC14Q08ET2 396 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 TRA2AQ13595 282 aaKnown RBP eCLIP14□□□□□ -0.17
CHMP1A-202ENST00000535997 SNAI3Q3KNW1 292 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 SVBPQ8N300 66 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 CLRN3Q8NCR9 226 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF837Q96EG3 531 aaPredicted RBP14□□□□□ -0.17
CHMP1A-202ENST00000535997 CPNE2Q96FN4 548 aaPredicted RBP14□□□□□ -0.17
CHMP1A-202ENST00000535997 SLC39A1Q9NY26 324 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 GSKIPQ9P0R6 139 aa14□□□□□ -0.17
CHMP1A-202ENST00000535997 G3V3Y1 287 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 SGCEO43556 437 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 HOXB5P09067 269 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 GABRR1P24046 479 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 RBMXP38159 391 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 RAB35Q15286 201 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 PABPC1L2AQ5JQF8 200 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 BHLHE23Q8NDY6 225 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 SGCZQ96LD1 299 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 TSNAXQ99598 290 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF2Q9BSG1 426 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 SLC5A7Q9GZV3 580 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 METTL9Q9H1A3 318 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 HSF4Q9ULV5 492 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 IGKV1D-8A0A087WSZ0 117 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 NSG1A0A0A6YYJ2 146 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 TSPAN9O75954 239 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 CTSDP07339 412 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 EIF5AL1Q6IS14 154 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 PLXDC2Q6UX71 529 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 SGPP2Q8IWX5 399 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 GPR137CQ8N3F9 429 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 SAT2Q96F10 170 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 MICU1Q9BPX6 476 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 MMP26Q9NRE1 261 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 RYDENQ9NUL5 291 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 LPAR3Q9UBY5 353 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 ANXA10Q9UJ72 324 aa13.99□□□□□ -0.17
CHMP1A-202ENST00000535997 PMS2P1A4D2B8 440 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 SYNGR3O43761 229 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 ACTL6AO96019 429 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 PLATP00750 562 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 CST2P09228 141 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 C10orf91Q5T1B1 145 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 OR51F2Q8NH61 342 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 SRXN1Q9BYN0 137 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 PCDHB16Q9NRJ7 776 aa13.98□□□□□ -0.17
CHMP1A-202ENST00000535997 ZNF629Q9UEG4 869 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms