RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 STX12Q86Y82 276 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 ZDHHC21Q8IVQ6 265 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 LAX1Q8IWV1 398 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 ATG16L2Q8NAA4 619 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 OR1M1Q8NGA1 313 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 OR2T4Q8NH00 348 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 TMEM163Q8TC26 289 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 CCL17Q92583 94 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 OTULINQ96BN8 352 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 RAB39BQ96DA2 213 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 TIMD4Q96H15 378 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 C7orf34Q96L11 122 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 OR5M11Q96RB7 305 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 TCEAL7Q9BRU2 100 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 BARHL1Q9BZE3 327 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 EGLN1Q9GZT9 426 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 POFUT1Q9H488 388 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 METTL17Q9H7H0 456 aaPredicted RBP7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 PPP1R3EQ9H7J1 279 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 MSL2Q9HCI7 577 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 ISYNA1Q9NPH2 558 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 NDUFB11Q9NX14 153 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 PLEK2Q9NYT0 353 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 VSX1Q9NZR4 365 aaPredicted RBP7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 ASH2LQ9UBL3 628 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 CGGBP1Q9UFW8 167 aaPredicted RBP7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 SSR3Q9UNL2 185 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 WIPI2Q9Y4P8 454 aa7.25□□□□□ -1.25
SFSWAP-202ENST00000535202 TRAV6A0A075B6T7 132 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 TRAV20A0A0B4J274 112 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 DNASE2O00115 360 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 TCF21O43680 179 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 OR10H3O60404 316 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SELENOFO60613 162 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 MITFO75030 526 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 GPANK1O95872 356 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 FABP3P05413 133 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 CLEC2LP0C7M8 214 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 ANXA8P13928 327 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SLC6A1P30531 599 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 RPS19P39019 145 aaKnown RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 CDKN2AP42771 156 aaKnown RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SMIM11AP58511 58 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 TNFAIP6P98066 277 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 MLLT11Q13015 90 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 PSG7Q13046 419 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 HNRNPA0Q13151 305 aaKnown RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SMN1Q16637 294 aaKnown RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SPRNQ5BIV9 151 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 LIPNQ5VXI9 398 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 ACSM5Q6NUN0 579 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 FAHD2BQ6P2I3 314 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 DNM1P34Q6PK57 102 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SHFQ7M4L6 423 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 KRT77Q7Z794 578 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 ZER1Q7Z7L7 766 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 JAZF1Q86VZ6 243 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 GLB1L2Q8IW92 636 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 HS3ST5Q8IZT8 346 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 MS4A15Q8N5U1 240 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 RFLNBQ8N5W9 214 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 NPEPL1Q8NDH3 523 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 BVESQ8NE79 360 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 OR52N1Q8NH53 320 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 RAB1CQ92928 201 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 PHF21AQ96BD5 680 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 FAHD2AQ96GK7 314 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 DIRAS2Q96HU8 199 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 LINC00052Q96N35 136 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 DIRC2Q96SL1 478 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 GPA33Q99795 319 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 C7orf50Q9BRJ6 194 aaKnown RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 FUZQ9BT04 418 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 TMPRSS13Q9BYE2 586 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 PRRG3Q9BZD7 231 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 MIXL1Q9H2W2 232 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 OR52D1Q9H346 318 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 GHITMQ9H3K2 345 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 SAV1Q9H4B6 383 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 REEP1Q9H902 201 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 ZDHHC8Q9ULC8 765 aa7.24□□□□□ -1.25
SFSWAP-202ENST00000535202 DYSFO75923 2080 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ARRDC5A6NEK1 342 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 RER1O15258 196 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 PLPP2O43688 288 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 TSC22D2O75157 780 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 SC5DO75845 299 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 TXNDC12O95881 172 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 PNPP00491 289 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 RENP00797 406 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 IGHV2-5P01817 119 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 FABP1P07148 127 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 CD55P08174 381 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 ADH4P08319 380 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 DBHP09172 617 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 SULT1A3P0DMM9 295 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 SULT1A4P0DMN0 295 aa7.23□□□□□ -1.25
SFSWAP-202ENST00000535202 PRKACGP22612 351 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms