RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ECH1Q13011 328 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 CDK5R1Q15078 307 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 RAB35Q15286 201 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 C3orf36Q3SXR2 165 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 PABPC1L2AQ5JQF8 200 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 CLVS2Q5SYC1 327 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 FAM27D1Q5T7N8 215 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 KCTD18Q6PI47 426 aaPredicted RBP10.67□□□□□ -0.7
SCARB1-204ENST00000535005 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 DNM1P46Q6ZS02 220 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 DNAAF1Q8NEP3 725 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 LGALS14Q8TCE9 139 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 SLAMF6Q96DU3 332 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 CXorf58Q96LI9 332 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 OR8B4Q96RC9 309 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 TBX5Q99593 518 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 TAS2R8Q9NYW2 309 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF69Q9UC07 566 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 NDRG3Q9UGV2 375 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 OR6C6A6NF89 314 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 PRR32B1ATL7 298 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 E9PI62 339 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 J3QLW9 94 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 GMDSO60547 372 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF19P17023 458 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 GDI2P50395 445 aaKnown RBP10.66□□□□□ -0.7
SCARB1-204ENST00000535005 SSX6Q7RTT6 188 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 MDP1Q86V88 176 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF679Q8IYX0 411 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 CMTM4Q8IZR5 234 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 RFLNBQ8N5W9 214 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 OR1S1Q8NH92 325 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 PCNPQ8WW12 178 aaKnown RBP10.66□□□□□ -0.7
SCARB1-204ENST00000535005 MUCL1Q96DR8 90 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 S100A16Q96FQ6 103 aaKnown RBP10.66□□□□□ -0.7
SCARB1-204ENST00000535005 NKIRAS2Q9NYR9 191 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 OPN4Q9UHM6 478 aa10.66□□□□□ -0.7
SCARB1-204ENST00000535005 A6NIN4 97 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF878C9JN71 531 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 SYNGR3O43761 229 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 AGFG2O95081 481 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 IGKV3-15P01624 115 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 IGLV1-44P01699 117 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 SERPINA5P05154 406 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 DCTDP32321 178 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 RAD52P43351 418 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 PLP2Q04941 152 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 FGL1Q08830 312 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 PPA1Q15181 289 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 KRTAP27-1Q3LI81 207 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF774Q6NX45 483 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 C22orf34Q6ZV56 151 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 OR1F12Q8NHA8 337 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 LILRB1Q8NHL6 650 aaPredicted RBP10.65□□□□□ -0.7
SCARB1-204ENST00000535005 AKR7LQ8NHP1 331 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 COQ8AQ8NI60 647 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 RPS4Y2Q8TD47 263 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 MARC2Q969Z3 335 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 CHIAQ9BZP6 476 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 AUNIPQ9H7T9 357 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 IFT22Q9H7X7 185 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 PLEK2Q9NYT0 353 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 LRRK2Q5S007 2527 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 CACNA1CQ13936 2221 aa10.65□□□□□ -0.7
SCARB1-204ENST00000535005 IFITM5A6NNB3 132 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 F5H5P2 479 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 TEX46H3BTG2 121 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 DNASE2O00115 360 aaPredicted RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 ABHD16AO95870 558 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 THBDP07204 575 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF14P17017 642 aaPredicted RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 OTX1P32242 354 aaPredicted RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 SSBP1Q04837 148 aaKnown RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 RBMS2Q15434 407 aaKnown RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 RSPO1Q2MKA7 263 aaPredicted RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 SFRP4Q6FHJ7 346 aaPredicted RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 LRRN1Q6UXK5 716 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 KRT77Q7Z794 578 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 ZNF584Q8IVC4 421 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 DTX3Q8N9I9 347 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 CPEB3Q8NE35 698 aaKnown RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 OR52I2Q8NH67 350 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 SNX33Q8WV41 574 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 MRPS24Q96EL2 167 aaKnown RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 SEC22CQ9BRL7 303 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 CENPMQ9NSP4 180 aa10.65□□□□□ -0.71
SCARB1-204ENST00000535005 MRM2Q9UI43 246 aaKnown RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 PURGQ9UJV8 347 aaKnown RBP10.65□□□□□ -0.71
SCARB1-204ENST00000535005 ANKHD1Q8IWZ3 2542 aaKnown RBP10.64□□□□□ -0.71
SCARB1-204ENST00000535005 A0A0D9SG52 128 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 A0A1W2PR80 420 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 ANXA2P2A6NMY6 339 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 DOK2O60496 412 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 TACSTD2P09758 323 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 H2BFMP0C1H6 154 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 MGMTP16455 207 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 CRYGSP22914 178 aa10.64□□□□□ -0.71
SCARB1-204ENST00000535005 GRNP28799 593 aaKnown RBP10.64□□□□□ -0.71
SCARB1-204ENST00000535005 OR12D2P58182 307 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms