RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SP4Q02446 784 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 KDSRQ06136 332 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 TPTE2P1Q5T6R2 138 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 TMEM236Q5W0B7 351 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 ZYG11AQ6WRX3 759 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 RGS9BPQ6ZS82 235 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 SCXQ7RTU7 201 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 ARL10Q8N8L6 244 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 LFNGQ8NES3 379 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 OR2M7Q8NG81 312 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 OR1L4Q8NGR5 311 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 OR5H2Q8NGV7 314 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 GPR151Q8TDV0 419 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 ORAOV1Q8WV07 137 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 RLN3Q8WXF3 142 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 NABP2Q9BQ15 211 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 Q9BRP9 147 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 MFSD1Q9H3U5 465 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 OR5V1Q9UGF6 321 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 CYB5R1Q9UHQ9 305 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 VPREB3Q9UKI3 123 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 FBXL3Q9UKT7 428 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 KNSTRNQ9Y448 316 aa-0.38□□□□□ -2.47
COPB1-212ENST00000534771 FN1P02751 2386 aaKnown RBP-0.38□□□□□ -2.47
COPB1-212ENST00000534771 USP47Q96K76 1375 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 JCADQ9P266 1359 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 TRBV24-1A0A075B6N3 115 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 TRBV6-5A0A0K0K1A5 114 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 A0A1W2PPE3 182 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 A6NDN8 102 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 A6NED7 52 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PCP4L1A6NKN8 68 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SNTNA6NMZ2 147 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 A8MUN3 132 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 F5H5P2 479 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 J3QQQ9 107 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 CLDN11O75508 207 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 AQP8O94778 261 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SMC2O95347 1197 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 TSPAN12O95859 305 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 HPRT1P00492 218 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 IL1BP01584 269 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SERPINE2P07093 398 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PGA5P0DJD9 388 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 USF1P22415 310 aaPredicted RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 IL12BP29460 328 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PBLDP30039 288 aaPredicted RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PEBP1P30086 187 aaKnown RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PFN2P35080 140 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 NAA10P41227 235 aaPredicted RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 RPL26P61254 145 aaKnown RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 GRB2P62993 217 aaKnown RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 ITIH4Q14624 930 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 ELOCQ15369 112 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 UAP1Q16222 522 aaPredicted RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PSMD5Q16401 504 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 HADHQ16836 314 aaKnown RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 GCSAMLQ5JQS6 135 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 NIPAL1Q6NVV3 410 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 CERS6Q6ZMG9 384 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SLC22A9Q8IVM8 553 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SDR9C7Q8NEX9 313 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 OR1S1Q8NH92 325 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 TSKUQ8WUA8 353 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 PYURFQ96I23 114 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 CAPZA3Q96KX2 299 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 UBE2E2Q96LR5 201 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 RDH12Q96NR8 316 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 TEAD3Q99594 435 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 THUMPD2Q9BTF0 503 aaKnown RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 TPPP3Q9BW30 176 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 ILKAPQ9H0C8 392 aaPredicted RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 C1orf21Q9H246 121 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 COQ10BQ9H8M1 238 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SLC35D1Q9NTN3 355 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SLC39A1Q9NY26 324 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 RPL26L1Q9UNX3 145 aaKnown RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 SLC17A4Q9Y2C5 497 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 ASB3Q9Y575 518 aa-0.39□□□□□ -2.47
COPB1-212ENST00000534771 DMBT1Q9UGM3 2413 aaPredicted RBP-0.39□□□□□ -2.47
COPB1-212ENST00000534771 STAB1Q9NY15 2570 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 IGHV3-43A0A0B4J1X8 118 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 A0A1B0GVG6 124 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 TSPAN11A1L157 253 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 KRT87PA6NCN2 255 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 K7EPK0 472 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 MYL12BO14950 172 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 MRPS14O60783 128 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 POP7O75817 140 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 MT-ND3P03897 115 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 SNRPAP09012 282 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 PGA4P0DJD7 388 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 PGA3P0DJD8 388 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 NCF1P14598 390 aaPredicted RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 GAP43P17677 238 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 BCKDHBP21953 392 aa-0.4□□□□□ -2.47
COPB1-212ENST00000534771 MDH1P40925 334 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 HINT1P49773 126 aaPredicted RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 EIF3EP60228 445 aaKnown RBP-0.4□□□□□ -2.47
COPB1-212ENST00000534771 ADIGQ0VDE8 80 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms