RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 RASL12Q9NYN1 266 aa11.26□□□□□ -0.61
CCDC84-208ENST00000534656 ACTR3BQ9P1U1 418 aa11.26□□□□□ -0.61
CCDC84-208ENST00000534656 LRP12Q9Y561 859 aa11.26□□□□□ -0.61
CCDC84-208ENST00000534656 U3KQV3 271 aa11.26□□□□□ -0.61
CCDC84-208ENST00000534656 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
CCDC84-208ENST00000534656 A0A1W2PPH5 198 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 SELENOFO60613 162 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 MTRF1O75570 445 aaKnown RBP11.25□□□□□ -0.61
CCDC84-208ENST00000534656 ATP6V1B2P21281 511 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 PAICSP22234 425 aaKnown RBP11.25□□□□□ -0.61
CCDC84-208ENST00000534656 LGALS4P56470 323 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 LOXL3P58215 753 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
CCDC84-208ENST00000534656 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
CCDC84-208ENST00000534656 CEP78Q5JTW2 689 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 OR2T5Q6IEZ7 315 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 C16orf89Q6UX73 402 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 THAP5Q7Z6K1 395 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 OR5A2Q8NGI9 324 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 OR2T29Q8NH02 315 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 FAM81AQ8TBF8 368 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 AQP3Q92482 292 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 ITFG2Q969R8 447 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 NIPSNAP1Q9BPW8 284 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 MMP28Q9H239 520 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 MAGIXQ9H6Y5 334 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 REEP1Q9H902 201 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 ZNF702PQ9H963 129 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 SERTAD4Q9NUC0 356 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 TAGLN3Q9UI15 199 aa11.25□□□□□ -0.61
CCDC84-208ENST00000534656 SAMHD1Q9Y3Z3 626 aaKnown RBP11.25□□□□□ -0.61
CCDC84-208ENST00000534656 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 A0A1W2PPE2 198 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 A0A1W2PR64 198 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 TCRBV5S2A0A599 114 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 RFPL4AA6NLU0 287 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 VGLL3A8MV65 326 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 PRR23D1E9PI22 279 aaPredicted RBP11.24□□□□□ -0.61
CCDC84-208ENST00000534656 RFPL4AL1F8VTS6 287 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 H3BN98 237 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 SNX3O60493 162 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 FBXO24O75426 580 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 PRR23D2P0DMB1 279 aaPredicted RBP11.24□□□□□ -0.61
CCDC84-208ENST00000534656 CD28P10747 220 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 HAGHLQ6PII5 290 aaPredicted RBP11.24□□□□□ -0.61
CCDC84-208ENST00000534656 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 Q8N2B8 174 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 ZNF561Q8N587 486 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 CD177Q8N6Q3 437 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 OR10G2Q8NGC3 310 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 SGCDQ92629 289 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 CDCA4Q9BXL8 241 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 ARL8BQ9NVJ2 186 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 NECAP2Q9NVZ3 263 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 NDE1Q9NXR1 346 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 KLHDC2Q9Y2U9 406 aa11.24□□□□□ -0.61
CCDC84-208ENST00000534656 FAM90A8PA6NJQ4 464 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 ACOD1A6NK06 481 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 OR5B21A6NL26 309 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 SLC1A7O00341 560 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 ATP6V1B1P15313 513 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 COX7A1P24310 79 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 PRDX2P32119 198 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 ERVFRD-1P60508 538 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 HABP2Q14520 560 aaPredicted RBP11.23□□□□□ -0.61
CCDC84-208ENST00000534656 PLBD1Q6P4A8 553 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 MOB3CQ70IA8 216 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 TRPM8Q7Z2W7 1104 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 KRT77Q7Z794 578 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 LHFPL4Q7Z7J7 247 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 CALHM1Q8IU99 346 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 POC1AQ8NBT0 407 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 OR4M1Q8NGD0 313 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 OR2T27Q8NH04 317 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 R3HDM4Q96D70 268 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 FEVQ99581 238 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 FAM107BQ9H098 131 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 MED4Q9NPJ6 270 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 AURKAIP1Q9NWT8 199 aaPredicted RBP11.23□□□□□ -0.61
CCDC84-208ENST00000534656 TAS2R1Q9NYW7 299 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 USE1Q9NZ43 259 aa11.23□□□□□ -0.61
CCDC84-208ENST00000534656 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 PRODHO43272 600 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 CCL3L1P16619 93 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 ALOX5APP20292 161 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 RAB13P51153 203 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 RIPPLY1Q0D2K3 151 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 SMIM21Q3B7S5 101 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 FAM98BQ52LJ0 330 aaKnown RBP11.22□□□□□ -0.61
CCDC84-208ENST00000534656 PLCXD3Q63HM9 321 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 CCBE1Q6UXH8 406 aaPredicted RBP11.22□□□□□ -0.61
CCDC84-208ENST00000534656 OR4F17Q8NGA8 305 aa11.22□□□□□ -0.61
CCDC84-208ENST00000534656 GIPC3Q8TF64 312 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms