RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MRPL13Q9BYD1 178 aaKnown RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 NUF2Q9BZD4 464 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM192AQ9GZU8 254 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PAIP1Q9H074 479 aaKnown RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 NUAK2Q9H093 628 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 C1orf198Q9H425 327 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PPP1R3EQ9H7J1 279 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ELL3Q9HB65 397 aaPredicted RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 C1orf123Q9NWV4 160 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 MRPL39Q9NYK5 338 aaKnown RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 RPS6KB2Q9UBS0 482 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TMED5Q9Y3A6 229 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TIMM10BQ9Y5J6 103 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TSSC4Q9Y5U2 329 aaPredicted RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 KPTNQ9Y664 436 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 V9GYQ6 96 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A087X0M5 115 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A096LPI6 279 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 PRSS51A0A1B0GVH4 220 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A1B0GX30 115 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MEX3AA1L020 520 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 GAGE10A6NGK3 116 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 OOEPA6NGQ2 149 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 NKX6-3A6NJ46 265 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TRIM64CA6NLI5 447 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM114B3SHH9 223 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 BLOC1S5-TXNDC5H3BN57 136 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 H7C1C5 153 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 KPNA4O00629 521 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ACOT8O14734 319 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RNF13O43567 381 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 NDUFB8O95169 186 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 OR6A2O95222 327 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 LYPD3O95274 346 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 DUS4LO95620 317 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 IGHG1P01857 330 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 THY1P04216 161 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 BCHEP06276 602 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 COX4I1P13073 169 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 IRF2P14316 349 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 CPA3P15088 417 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 FUT1P19526 365 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 PRPS1L1P21108 318 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 GSTM3P21266 225 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 CA6P23280 308 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MYF6P23409 242 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 COX7A1P24310 79 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 POU1F1P28069 291 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 IL12AP29459 219 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL3P39023 403 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 AQP2P41181 271 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 NPY4RP50391 375 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF84P51523 738 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MVDP53602 400 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RAD23AP54725 363 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 UGT2B15P54855 530 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 CLDN8P56748 225 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM3BP58499 235 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 STX1BP61266 288 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 LCN6P62502 163 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RPP30P78346 268 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MRPS34P82930 218 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ENDOGQ14249 297 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 GNA13Q14344 377 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RSPO1Q2MKA7 263 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 DEFB136Q30KP8 78 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ANXA2RQ3ZCQ2 193 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 GTDC1Q4AE62 458 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ALG10BQ5I7T1 473 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 WDR38Q5JTN6 314 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SPANXN4Q5MJ08 99 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ARMC4Q5T2S8 1044 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM27BQ5VT28 67 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MZT2BQ6NZ67 158 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 KCTD18Q6PI47 426 aaPredicted RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC25A47Q6Q0C1 308 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ZYG11AQ6WRX3 759 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TIFABQ6ZNK6 161 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 DPPA2Q7Z7J5 298 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ZER1Q7Z7L7 766 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 RBM45Q8IUH3 476 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC30A8Q8IWU4 369 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 C11orf53Q8IXP5 236 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MKXQ8IYA7 352 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF440Q8IYI8 595 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 LINC00471Q8N535 108 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 GCSAMQ8N6F7 178 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 OR11L1Q8NGX0 322 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 OR13G1Q8NGZ3 307 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 OR5J2Q8NH18 312 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM81AQ8TBF8 368 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 NPRL2Q8WTW4 380 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 NUDCD2Q8WVJ2 157 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 H1FXQ92522 213 aaKnown RBP2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 MAL2Q969L2 176 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 EME1Q96AY2 570 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 SLCO4A1Q96BD0 722 aa2.33□□□□□ -2.04
CHMP4A-208ENST00000534106 TUBGCP3Q96CW5 907 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms