RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967		G3V2T6	193 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967		M0R1B8	84 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	KLF8	O95600	359 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TTC4	O95801	387 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GYPC	P04921	128 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ARG1	P05089	322 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OR5AL1	P0C617	328 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SLC2A5	P22732	501 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TSFM	P43897	325 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GALR1	P47211	349 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	BCL2L1	Q07817	233 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PPP1R1A	Q13522	171 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TSN	Q15631	228 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	MLANA	Q16655	118 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	CYP51A1	Q16850	503 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	CEACAM21	Q3KPI0	293 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RNF212	Q495C1	297 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TPTE2P1	Q5T6R2	138 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GFRAL	Q6UXV0	394 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	C12orf54	Q6X4T0	127 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ZNF793	Q6ZN11	406 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TMEM219	Q86XT9	240 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ZNF383	Q8NA42	475 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OR2Z1	Q8NG97	314 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	APOBEC4	Q8WW27	367 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ARPC1A	Q92747	370 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RCN3	Q96D15	328 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	FAM173A	Q9BQD7	235 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	MRI	Q9BWK5	157 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ZNF556	Q9HAH1	456 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	UGT2A1	Q9Y4X1	527 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SMCHD1	A6NHR9	2005 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	C1orf167	Q5SNV9	1468 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	MYH11	P35749	1972 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967		A0A087WWV3	80 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967		A0A0X1KG70	313 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	DAPL1	A0PJW8	107 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	KRTAP23-1	A1A580	65 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	LINC00862	A6NCI5	91 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	IGLON5	A6NGN9	336 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	CEACAM18	A8MTB9	384 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GABRP	O00591	440 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PHYH	O14832	338 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RAD51C	O43502	376 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PLIN3	O60664	434 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GAGE7	O76087	117 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GAGE12F	P0CL80	117 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GAGE12G	P0CL81	117 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GAGE12I	P0CL82	117 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	DAO	P14920	347 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RAB5A	P20339	215 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RBP2	P50120	134 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	DVL1P1	P54792	670 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PAX9	P55771	341 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RND3	P61587	244 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	MRPS11	P82912	194 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SLC25A11	Q02978	314 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GAGE4	Q13068	117 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	EDDM3A	Q14507	147 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ZNF726P1	Q15940	193 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SLC25A35	Q3KQZ1	300 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TMEM97	Q5BJF2	176 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OGFOD2	Q6N063	350 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TMEM207	Q6UWW9	146 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SVOPL	Q8N434	492 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SMIM20	Q8N5G0	67 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ZNF676	Q8N7Q3	588 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GATD1	Q8NB37	220 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OR4K17	Q8NGC6	315 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PIFO	Q8TCI5	191 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	EEF1AKMT1	Q8WVE0	214 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	C12orf43	Q96C57	262 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	L3HYPDH	Q96EM0	354 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GPR21	Q99679	349 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SIGMAR1	Q99720	223 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	C20orf144	Q9BQM9	153 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SNX12	Q9UMY4	172 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	CAMTA1	Q9Y6Y1	1673 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967		A0A1B0GUL6	1792 aa		4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SIPA1L3	O60292	1781 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-222	ENST00000531967	DISP2	A7MBM2	1401 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	S1PR2	O95136	353 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	NHLRC4	P0CG21	123 aa	Predicted RBP	4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SPI1	P17947	270 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	NELFE	P18615	380 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RPS9	P46781	194 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	HNRNPA3	P51991	378 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SUB1	P53999	127 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PPP1CB	P62140	327 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RPL18A	Q02543	176 aa	Known RBP	4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TWF1	Q12792	350 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GPR18	Q14330	331 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	HIST3H3	Q16695	136 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PYCR3	Q53H96	274 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	MS4A13	Q5J8X5	152 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GPRC6A	Q5T6X5	926 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	FHL5	Q5TD97	284 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TFAP2E	Q6VUC0	442 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SLC22A15	Q8IZD6	547 aa		4.35	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GPD1L	Q8N335	351 aa		4.35	□□□□□ -1.71

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