RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 DNAJC27Q9NZQ0 273 aa7.22□□□□□ -1.25
USF1-210ENST00000531842 ZNF319Q9P2F9 582 aa7.22□□□□□ -1.25
USF1-210ENST00000531842 POMPQ9Y244 141 aa7.22□□□□□ -1.25
USF1-210ENST00000531842 RHBDD3Q9Y3P4 386 aa7.22□□□□□ -1.25
USF1-210ENST00000531842 COMMD3-BMI1R4GMX3 469 aa7.22□□□□□ -1.25
USF1-210ENST00000531842 IGKV1D-17A0A075B6S4 117 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 TCRBV3S1A0A5B6 114 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 A6NDX4 124 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 ZNF878C9JN71 531 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 M0R1W7 72 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 RHBDL1O75783 438 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 IFNGP01579 166 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 PF4P02776 101 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 GYPBP06028 91 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 CHRM2P08172 466 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 PF4V1P10720 104 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 OTX1P32242 354 aaPredicted RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 GABRA2P47869 451 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 BLVRAP53004 296 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 GRB2P62993 217 aaKnown RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 FAM3AP98173 230 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 CD83Q01151 205 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 CRMP1Q14194 572 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 MICAQ29983 383 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 C11orf91Q3C1V1 193 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 ARSJQ5FYB0 599 aaPredicted RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 NKAPLQ5M9Q1 402 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 NCR3LG1Q68D85 454 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 C11orf88Q6PI97 169 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 RASSF6Q6ZTQ3 369 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 C18orf65Q6ZTR6 163 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 KCTD8Q6ZWB6 473 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 FAM57BQ71RH2 274 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 SLC16A9Q7RTY1 509 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 Q8N2B8 174 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 C11orf42Q8N5U0 333 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 AQP11Q8NBQ7 271 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 PAPD5Q8NDF8 572 aaKnown RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 TMEM185AQ8NFB2 350 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 OR5AU1Q8NGC0 362 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 ANGPTL6Q8NI99 470 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 SGK3Q96BR1 496 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 REEP6Q96HR9 211 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 PGAM5Q96HS1 289 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 RAB3IPQ96QF0 476 aaPredicted RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 MICU1Q9BPX6 476 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 PAPOLGQ9BWT3 736 aaKnown RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 DGCR6LQ9BY27 220 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 NMNAT2Q9BZQ4 307 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 YY1AP1Q9H869 796 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 RNPEPL1Q9HAU8 725 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 TCF19Q9Y242 345 aa7.21□□□□□ -1.26
USF1-210ENST00000531842 SF3B6Q9Y3B4 125 aaKnown RBP7.21□□□□□ -1.26
USF1-210ENST00000531842 DHRS12A0PJE2 317 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 NKX6-3A6NJ46 265 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 AQP12BA6NM10 295 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 ANXA2P2A6NMY6 339 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 RIIAD1A6NNX1 92 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 SIGLEC5O15389 551 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 GYG2O15488 501 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 SYNGR1O43759 233 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 PEX14O75381 377 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 TIPRLO75663 272 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 SOX14O95416 240 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 APOC1P02654 83 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 RAP2AP10114 183 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 CLUP10909 449 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 SPI1P17947 270 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 PRKACGP22612 351 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 CFL1P23528 166 aaKnown RBP7.2□□□□□ -1.26
USF1-210ENST00000531842 CD24P25063 80 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 GSTT1P30711 240 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 GSK3AP49840 483 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 SLC25A1P53007 311 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 COL10A1Q03692 680 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 ZNF273Q14593 569 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 CNN3Q15417 329 aaKnown RBP7.2□□□□□ -1.26
USF1-210ENST00000531842 ATPAF1Q5TC12 328 aaPredicted RBP7.2□□□□□ -1.26
USF1-210ENST00000531842 CD300LDQ6UXZ3 194 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 ERI1Q8IV48 349 aaKnown RBP7.2□□□□□ -1.26
USF1-210ENST00000531842 AQP12AQ8IXF9 295 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 FTMTQ8N4E7 242 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 CSNK2A3Q8NEV1 391 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 OR2T33Q8NG76 320 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 OR52H1Q8NGJ2 320 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 MYDGFQ969H8 173 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 UTP4Q969X6 686 aaKnown RBP7.2□□□□□ -1.26
USF1-210ENST00000531842 SPSB4Q96A44 273 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 DMRTB1Q96MA1 342 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 ZNF488Q96MN9 340 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 INTS14Q96SY0 518 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 FEVQ99581 238 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 OCSTAMPQ9BR26 566 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 FAM234AQ9H0X4 552 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 OR10A2Q9H208 303 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 ARMC1Q9NVT9 282 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 BAIAP2Q9UQB8 552 aa7.2□□□□□ -1.26
USF1-210ENST00000531842 SAMHD1Q9Y3Z3 626 aaKnown RBP7.2□□□□□ -1.26
USF1-210ENST00000531842 KIAA2026Q5HYC2 2103 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms