RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SNX24Q9Y343 169 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 PPIL1Q9Y3C6 166 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 PUS1Q9Y606 427 aaKnown RBP eCLIP2.89□□□□□ -1.95
USP47-211ENST00000531513 USH1CQ9Y6N9 552 aa2.89□□□□□ -1.95
USP47-211ENST00000531513 KIAA0232Q92628 1395 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SCN2AQ99250 2005 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ZNFX1Q9P2E3 1918 aaKnown RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 IGKV6D-21A0A0A0MT36 114 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 C1orf232A0A0U1RR37 186 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 A0A1W2PP18 115 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ISPDA4D126 451 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 GOLGA8IPA6NC78 632 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 PINLYPA6NC86 204 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 RSPH10B2B2RC85 870 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 F8VZ95 297 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ITGB1BP1O14713 200 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CDIPTO14735 213 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SOCS1O15524 211 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CRXO43186 299 aaPredicted RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 NDUFS5O43920 106 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SERPINB7O75635 380 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 RSPH10BP0C881 870 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CD40LGP29965 261 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 RPA3P35244 121 aaPredicted RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 ERFP50548 548 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 RAB38P57729 211 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 UBE2G2P60604 165 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ESRRGP62508 458 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CD164Q04900 197 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 PRKCDQ05655 676 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CKAP4Q07065 602 aaKnown RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 PPIDQ08752 370 aaKnown RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 TRAM1Q15629 374 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 NTM-AS1Q6ZSK4 140 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 Q6ZSR6 202 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SSX7Q7RTT5 188 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SLC16A13Q7RTY0 426 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CALHM1Q8IU99 346 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 KRTAP11-1Q8IUC1 163 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 WDFY1Q8IWB7 410 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ZCCHC24Q8N2G6 241 aaKnown RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 SPICQ8N5J4 248 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 OR1J4Q8NGS1 313 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 OR5W2Q8NH69 310 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SFXN5Q8TD22 340 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 TMEM159Q96B96 161 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 FLYWCH2Q96CP2 140 aaKnown RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 ZNF799Q96GE5 643 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SNF8Q96H20 258 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ALS2CR12Q96Q35 445 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 RBBP8Q99708 897 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 FGF23Q9GZV9 251 aaPredicted RBP2.88□□□□□ -1.95
USP47-211ENST00000531513 TPK1Q9H3S4 243 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 LHX9Q9NQ69 397 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 PSMD13Q9UNM6 376 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 SLC22A14Q9Y267 594 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ORC6Q9Y5N6 252 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 CROCCQ5TZA2 2017 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 ABCB11O95342 1321 aa2.88□□□□□ -1.95
USP47-211ENST00000531513 A0A096LNJ9 63 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 A0A1B0GX12 115 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 ZNF233A6NK53 670 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 TMX2-CTNND1H3BSU7 103 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 M0R1X1 148 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 TCAPO15273 167 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 AQP9O43315 295 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 CCDC22O60826 627 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 MT-ND4P03905 459 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 OCMP0CE72 109 aaPredicted RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 HLA-GP17693 338 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 KIR3DL2P43630 455 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 TUFMP49411 452 aaKnown RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 PSMB2P49721 201 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 MNAT1P51948 309 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 PLTPP55058 493 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 OR10A3P58181 314 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 LOXL1Q08397 574 aaPredicted RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 RAB31Q13636 194 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 C16orf72Q14CZ0 275 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 TRIP13Q15645 432 aaPredicted RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 SMUG1Q53HV7 270 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 FAM78AQ5JUQ0 283 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 RBM48Q5RL73 367 aaKnown RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 IDNKQ5T6J7 187 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 MKXQ8IYA7 352 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 PGAM4Q8N0Y7 254 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 DRAM1Q8N682 238 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 OR4K17Q8NGC6 315 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 OR13G1Q8NGZ3 307 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 UBA3Q8TBC4 463 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 TNFRSF14Q92956 283 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 MRPL48Q96GC5 212 aaKnown RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 RILPQ96NA2 401 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 OR2M4Q96R27 311 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 METTL26Q96S19 204 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 C7orf50Q9BRJ6 194 aaKnown RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 NXF2Q9GZY0 626 aaKnown RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 DSN1Q9H410 356 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 SLC38A10Q9HBR0 1119 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 ABCB9Q9NP78 766 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms