RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 C1orf87Q8N0U7 546 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 DNAAF1Q8NEP3 725 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 RAB1CQ92928 201 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 TIMD4Q96H15 378 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 RNF170Q96K19 258 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 HIST1H2AAQ96QV6 131 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 RSL24D1Q9UHA3 163 aaKnown RBP12.16□□□□□ -0.46
CPSF1-206ENST00000531480 GSTK1Q9Y2Q3 226 aa12.16□□□□□ -0.46
CPSF1-206ENST00000531480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.16□□□□□ -0.463e-9■■■■□ 19.5
CPSF1-206ENST00000531480 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 A6NIN4 97 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 LRRC30A6NM36 301 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 ZNF732B4DXR9 585 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 WNT9BO14905 357 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 CD36P16671 472 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 MPZP25189 248 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 RBMXP38159 391 aaKnown RBP12.15□□□□□ -0.46
CPSF1-206ENST00000531480 RANBP1P43487 201 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 GPM6AP51674 278 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 LMO4P61968 165 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 BTG1P62324 171 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 KRTAP1-1Q07627 177 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 TPBGQ13641 420 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 ZMYND11Q15326 602 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 TMEM155Q4W5P6 130 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 ASPHD2Q6ICH7 369 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 MOB3CQ70IA8 216 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 LRRC28Q86X40 367 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-206ENST00000531480 ANKRD13BQ86YJ7 626 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 CLVS1Q8IUQ0 354 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-206ENST00000531480 GCSAMQ8N6F7 178 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 SCCPDHQ8NBX0 429 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 OR13C3Q8NGS6 347 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 OR11L1Q8NGX0 322 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 FGGYQ96C11 551 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-206ENST00000531480 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 UFSP2Q9NUQ7 469 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 RNF7Q9UBF6 113 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 SSR3Q9UNL2 185 aa12.15□□□□□ -0.46
CPSF1-206ENST00000531480 ABCA1O95477 2261 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 SRRM5B3KS81 715 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 H3BSH0 61 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-206ENST00000531480 TNFRSF13BO14836 293 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-206ENST00000531480 SLC22A1O15245 554 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 GPX5O75715 221 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 SC5DO75845 299 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 INMTO95050 263 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 CYB5R3P00387 301 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-206ENST00000531480 GRPP07492 148 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 ACAA1P09110 424 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-206ENST00000531480 INHBBP09529 407 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 CPEP16870 476 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 CELP19835 753 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 CPT2P23786 658 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 CRIP3Q6Q6R5 217 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF826PQ6ZT77 177 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 PEG10Q86TG7 708 aaKnown RBP12.14□□□□□ -0.47
CPSF1-206ENST00000531480 SERPINA12Q8IW75 414 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 ZFP41Q8N8Y5 198 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 AQP3Q92482 292 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 SPSB1Q96BD6 273 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 TMEM165Q9HC07 324 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 C1orf123Q9NWV4 160 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 DHDHQ9UQ10 334 aa12.14□□□□□ -0.47
CPSF1-206ENST00000531480 SETD2Q9BYW2 2564 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-206ENST00000531480 CSPG4Q6UVK1 2322 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 IGKV1-27A0A075B6S5 117 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 TRBV5-7A0A0A0MS05 114 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 CDIPTO14735 213 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF20P17024 532 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 ATF1P18846 271 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 GABRA5P31644 462 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
CPSF1-206ENST00000531480 FUT6P51993 359 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
CPSF1-206ENST00000531480 TMEM249Q2WGJ8 235 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF404Q494X3 552 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 Q499Y3 187 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 DMRTC1Q5HYR2 192 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 GPR107Q5VW38 600 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 TEX36Q5VZQ5 186 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 ZNF573Q86YE8 665 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 MUC20Q8N307 709 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-206ENST00000531480 OR5D14Q8NGL3 314 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 PHYHIPQ92561 330 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 RPL3LQ92901 407 aaKnown RBP12.13□□□□□ -0.47
CPSF1-206ENST00000531480 TMEM106AQ96A25 262 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 OPALINQ96PE5 141 aa12.13□□□□□ -0.47
CPSF1-206ENST00000531480 PKIBQ9C010 78 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms