RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FAM90A24PP0C7X0 464 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 ZNF735P0CB33 412 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4L2P0CJ85 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4L3P0CJ86 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4L4P0CJ87 422 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4L5P0CJ88 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4L6P0CJ89 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4L7P0CJ90 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 VSIG10L2P0DP72 767 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 RPA2P15927 270 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 ABOP16442 354 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 MGMTP16455 207 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 ANXA7P20073 488 aaKnown RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 NFYAP23511 347 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 DTYMKP23919 212 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 ARR3P36575 388 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 HTR5AP47898 357 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 RBP2P50120 134 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 LHX2P50458 406 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 AP2S1P53680 142 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 PER3P56645 1201 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 CLDN18P56856 261 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 TSPAN5P62079 268 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 CXADRP78310 365 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 CYCSP99999 105 aaKnown RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 OR8B8Q15620 311 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 TRIP6Q15654 476 aaKnown RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 RSPO1Q2MKA7 263 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 CEACAM16Q2WEN9 425 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PHYHD1Q5SRE7 291 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 ATPAF1Q5TC12 328 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 TMEM65Q6PI78 240 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 TEX261Q6UWH6 196 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PLXDC2Q6UX71 529 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 COLCA1Q6ZS62 124 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 GALNTL5Q7Z4T8 443 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 LYG2Q86SG7 212 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 CCDC36Q8IYA8 594 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 SAXO1Q8IYX7 474 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 GALNT16Q8N428 558 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 C12orf45Q8N5I9 185 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 ZSCAN4Q8NAM6 433 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 ZFP62Q8NB50 900 aaPredicted RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 BEST4Q8NFU0 473 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 TERB2Q8NHR7 220 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 MITD1Q8WV92 249 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 NKD1Q969G9 470 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PIGTQ969N2 578 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FBXO17Q96EF6 278 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 REEP6Q96HR9 211 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 LYZL4Q96KX0 146 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PHB2Q99623 299 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 SEC22CQ9BRL7 303 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 C1QTNF5Q9BXJ0 243 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 TTTY12Q9BZ98 90 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 SELENOIQ9C0D9 397 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 METTL9Q9H1A3 318 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 POFUT1Q9H488 388 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PLSCR3Q9NRY6 295 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 GLRX2Q9NS18 164 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PIPOXQ9P0Z9 390 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 ZNF319Q9P2F9 582 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 EIF3KQ9UBQ5 218 aaKnown RBP4.84□□□□□ -1.63
PCF11-205ENST00000530906 DUX4Q9UBX2 424 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 KCNN3Q9UGI6 736 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 KLK13Q9UKR3 277 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 FLVCR2Q9UPI3 526 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 SLC7A11Q9UPY5 501 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 PIGLQ9Y2B2 252 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 MAB21L2Q9Y586 359 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 U3KQ87 197 aa4.84□□□□□ -1.63
PCF11-205ENST00000530906 DOCK10Q96BY6 2186 aa4.84□□□□□ -1.64
PCF11-205ENST00000530906 TRIOO75962 3097 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 PIGBOS1A0A0B4J2F0 54 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ZNF816-ZNF321PA0A0X1KG74 233 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 hCG_38984A0A1B0GV85 526 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 A0A1W2PNU3 283 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 LINC00862A6NCI5 91 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 FOXI3A8MTJ6 420 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 CDRT15L2A8MXV6 281 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 L7N2F9 121 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 SLC22A5O76082 557 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 DUS4LO95620 317 aaKnown RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 CNOT4O95628 575 aaKnown RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 NRASP01111 189 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 CSTBP04080 98 aaKnown RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 LCATP04180 440 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 MMP7P09237 267 aaPredicted RBP4.83□□□□□ -1.64
PCF11-205ENST00000530906 SLC2A1P11166 492 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 PTHLHP12272 177 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 FAHP16930 419 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ZNF32P17041 273 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 KLK2P20151 261 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR3A4PP47883 348 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR3A3P47888 321 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 OR3A2P47893 321 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ZNF81P51508 661 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 FUT6P51993 359 aa4.83□□□□□ -1.64
PCF11-205ENST00000530906 ATP1B3P54709 279 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms