RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 KIAA1324LA8MWY0 1029 aaPredicted RBP11.79□□□□□ -0.52
USF1-209ENST00000529476 ZNF879B4DU55 563 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 TMEM178BH3BS89 294 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 CDIPTO14735 213 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 AZGP1P25311 298 aaKnown RBP11.79□□□□□ -0.52
USF1-209ENST00000529476 PSMB9P28065 219 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 NR4A2P43354 598 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 GPR6P46095 362 aaPredicted RBP11.79□□□□□ -0.52
USF1-209ENST00000529476 CNN3Q15417 329 aaKnown RBP11.79□□□□□ -0.52
USF1-209ENST00000529476 NEDD8Q15843 81 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 SSX1Q16384 188 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 ZNF181Q2M3W8 571 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 AVPI1Q5T686 147 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 PRIMA1Q86XR5 153 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 MS4A15Q8N5U1 240 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 OR5D14Q8NGL3 314 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 OR11L1Q8NGX0 322 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 TECTBQ96PL2 329 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 DERL3Q96Q80 235 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 SMR3AQ99954 134 aa11.79□□□□□ -0.52
USF1-209ENST00000529476 METTL17Q9H7H0 456 aaPredicted RBP11.79□□□□□ -0.52
USF1-209ENST00000529476 IGKV1-27A0A075B6S5 117 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 hCG_1807616A0A1W2PRN6 198 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 LRRC30A6NM36 301 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 PIN1P1O15428 100 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 SULT1B1O43704 296 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 ZNF205O95201 554 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 IRF2P14316 349 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 SLC25A16P16260 332 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 FUT6P51993 359 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 ACSM3Q53FZ2 586 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 HAGHLQ6PII5 290 aaPredicted RBP11.78□□□□□ -0.52
USF1-209ENST00000529476 WDR82Q6UXN9 313 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 RNF144BQ7Z419 303 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 ANGPTL5Q86XS5 388 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 BOLLQ8N9W6 283 aaKnown RBP11.78□□□□□ -0.52
USF1-209ENST00000529476 OR51A2Q8NGJ7 313 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 HPS1Q92902 700 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 BORCS8Q96FH0 119 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 REG4Q9BYZ8 158 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 SF3B6Q9Y3B4 125 aaKnown RBP11.78□□□□□ -0.52
USF1-209ENST00000529476 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
USF1-209ENST00000529476 CR1P17927 2039 aa11.77□□□□□ -0.52
USF1-209ENST00000529476 TRAV8-7A0A075B6U6 113 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 A0A096LNT2 108 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 WNT9BO14905 357 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 RHBDL1O75783 438 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
USF1-209ENST00000529476 FOSL1P15407 271 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 EGR1P18146 543 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 RAB3AP20336 220 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 PRKACBP22694 351 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 HAAOP46952 286 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 FAM27D1Q5T7N8 215 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 ZNF529Q6P280 563 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 UNQ9370/PRO34162Q6UXP9 181 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.53
USF1-209ENST00000529476 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 CALHM1Q8IU99 346 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 CIARTQ8N365 385 aaPredicted RBP11.77□□□□□ -0.53
USF1-209ENST00000529476 GCSAMQ8N6F7 178 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 DNAAF1Q8NEP3 725 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 AQP3Q92482 292 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 RAB1CQ92928 201 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 MUL1Q969V5 352 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 SPSB1Q96BD6 273 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 TIMD4Q96H15 378 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 SPACA5Q96QH8 159 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 NARFLQ9H6Q4 476 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 NOX4Q9NPH5 578 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 NDUFB11Q9NX14 153 aa11.77□□□□□ -0.53
USF1-209ENST00000529476 IGHV4-61A0A0C4DH41 118 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 ISPDA4D126 451 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 H7C1Q1 480 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 J3QT63 122 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 CCRL2O00421 344 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 SYNGR1O43759 233 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 SC5DO75845 299 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 RGS9O75916 674 aaPredicted RBP11.76□□□□□ -0.53
USF1-209ENST00000529476 ALX3O95076 343 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 PLATP00750 562 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 LHBP01229 141 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 IGHV2-70P01814 119 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 HCKP08631 526 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 SMIM18P0DKX4 95 aa11.76□□□□□ -0.53
USF1-209ENST00000529476 IGFBP3P17936 291 aaPredicted RBP11.76□□□□□ -0.53
USF1-209ENST00000529476 MAPK3P27361 379 aaPredicted RBP11.76□□□□□ -0.53
USF1-209ENST00000529476 GABRA5P31644 462 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms