RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 KPNA3O00505 521 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 PHYHO14832 338 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TCAPO15273 167 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 NUPL2O15504 423 aaKnown RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 HUS1O60921 280 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RP2O75695 350 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TSPAN13O95857 204 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 SNAI1O95863 264 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 IFNGP01579 166 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 CRHP06850 196 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 CISD3P0C7P0 127 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 OR8G3PP0DMU2 310 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 THRAP10827 490 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 ZNF250P15622 560 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 SRMP19623 302 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 OTX1P32242 354 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 RPL5P46777 297 aaKnown RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 TGM4P49221 684 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RND2P52198 227 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RGS8P57771 180 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 VSNL1P62760 191 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TNNC1P63316 161 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RCAN2Q14206 197 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 GINS1Q14691 196 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TRAM2Q15035 370 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 GUK1Q16774 197 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 PPM1LQ5SGD2 360 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 LRRC66Q68CR7 880 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 LRRN1Q6UXK5 716 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 NPSR1Q6W5P4 371 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 FBXW12Q6X9E4 464 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 LINC00299Q6ZSB3 139 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 ABHD13Q7L211 337 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 NDUFAF7Q7L592 441 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 OAFQ86UD1 273 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 NT5DC3Q86UY8 548 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 DHFR2Q86XF0 187 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TGIF2LXQ8IUE1 241 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 KATNAL2Q8IYT4 538 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 STK40Q8N2I9 435 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 C17orf78Q8N4C9 275 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 EID2Q8N6I1 236 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 ACBD4Q8NC06 268 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 DEDD2Q8WXF8 326 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 KIAA1143Q96AT1 154 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 TESCQ96BS2 214 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 PRRC1Q96M27 445 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RNF145Q96MT1 663 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 ZNF681Q96N22 645 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TGS1Q96RS0 853 aaKnown RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 TEAD3Q99594 435 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 CHP1Q99653 195 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 FOXC2Q99958 501 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 C2orf88Q9BSF0 95 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 TMED9Q9BVK6 235 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 ANGPTL4Q9BY76 406 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 SPNS1Q9H2V7 528 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 AUNIPQ9H7T9 357 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 METTL7AQ9H8H3 244 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 FGF20Q9NP95 211 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 ZDHHC4Q9NPG8 344 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 BIN3Q9NQY0 253 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 ZNF302Q9NR11 478 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 MRPL22Q9NWU5 206 aaKnown RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 SDHAF2Q9NX18 166 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 MAT2BQ9NZL9 334 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 RBMX2Q9Y388 322 aaKnown RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 POLR3HQ9Y535 204 aaPredicted RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 SLC22A7Q9Y694 548 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 SPATA31E1Q6ZUB1 1445 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 CDK13Q14004 1512 aaKnown RBP2.47□□□□□ -2.01
CTR9-204ENST00000529355 CROCC2H7BZ55 1655 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 KIF1BO60333 1816 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 MYH10P35580 1976 aa2.47□□□□□ -2.01
CTR9-204ENST00000529355 NRXN1Q9ULB1 1477 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ZNF532Q9HCE3 1301 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CEP152O94986 1710 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 PCF11O94913 1555 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 HFM1A2PYH4 1435 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 A0A0B4J2A0 478 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 A0A1W2PPV4 95 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 GMNCA6NCL1 334 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CCDC160A6NGH7 325 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 GABRR3A8MPY1 467 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 KCNK1O00180 336 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CDC7O00311 574 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SGCEO43556 437 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CTNSO60931 367 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 GP1BAP07359 652 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 GUSBP08236 651 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 PAEPP09466 180 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 LINC00869P0C866 280 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SLC35E2BP0CK96 405 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 SLC2A1P11166 492 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 CCNB1P14635 433 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 ZNF14P17017 642 aaPredicted RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 OGNP20774 298 aaKnown RBP2.46□□□□□ -2.02
CTR9-204ENST00000529355 PAX6P26367 422 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 LCN1P31025 176 aa2.46□□□□□ -2.02
CTR9-204ENST00000529355 TGFBR2P37173 567 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms