RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 BCL6BQ8N143 479 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-210ENST00000528441 CBR4Q8N4T8 237 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 ZNF555Q8NEP9 628 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 OR10Z1Q8NGY1 313 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 OR2T27Q8NH04 317 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 ZFAND2BQ8WV99 257 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 GATAD2BQ8WXI9 593 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 PPP1R14AQ96A00 147 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 SLC25A28Q96A46 364 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 SEH1LQ96EE3 360 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 RNFT2Q96EX2 444 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 MYCBPQ99417 103 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-210ENST00000528441 GABARAPL3Q9BY60 117 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 SMURF1Q9HCE7 757 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 HAO2Q9NYQ3 351 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 NLKQ9UBE8 527 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 SLC25A10Q9UBX3 287 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-210ENST00000528441 SLC22A13Q9Y226 551 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 POLDIP2Q9Y2S7 368 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 POLR3KQ9Y2Y1 108 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-210ENST00000528441 FAM96BQ9Y3D0 163 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 LRRC42Q9Y546 428 aa7.55□□□□□ -1.2
CMTM1-210ENST00000528441 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 A0A1W2PQL4 384 aaPredicted RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 A0A1W2PRD5 423 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 A0A1W2PRF3 423 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 A0A1W2PRM7 423 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 BTBD17A6NE02 478 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 DNAJC9-AS1A6NH13 148 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 SRRM5B3KS81 715 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 GATBO75879 557 aaKnown RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 NXPH2O95156 264 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 FSTL3O95633 263 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 PTBP3O95758 552 aaKnown RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 CYB5AP00167 134 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 PAHP00439 452 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 TTRP02766 147 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 SFTPBP07988 381 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 HTR1AP08908 422 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 PPIAL4GP0DN37 164 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 CFHR2P36980 270 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 PSMB10P40306 273 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 UBA52P62987 128 aaKnown RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 IL13RA1P78552 427 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 ROM1Q03395 351 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 PDCD1Q15116 288 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 SMIM21Q3B7S5 101 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 TEX36Q5VZQ5 186 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 ZBTB49Q6ZSB9 765 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 ZNF573Q86YE8 665 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 OR5A2Q8NGI9 324 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 HPSE2Q8WWQ2 592 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 UPRTQ96BW1 309 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 C12orf43Q96C57 262 aaKnown RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 BORCS8Q96FH0 119 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 MED30Q96HR3 178 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 WDFY2Q96P53 400 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 CNTD2Q9H8S5 307 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 ZMAT3Q9HA38 289 aaKnown RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 SIRT7Q9NRC8 400 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 MRM2Q9UI43 246 aaKnown RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 CAB39Q9Y376 341 aaPredicted RBP7.54□□□□□ -1.2
CMTM1-210ENST00000528441 PCDHGB1Q9Y5G3 927 aa7.54□□□□□ -1.2
CMTM1-210ENST00000528441 A0A1B0GW55 424 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 ANKRD61A6NGH8 418 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 OR2AT4A6NND4 320 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 PRR32B1ATL7 298 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 H0YAE9 185 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 J3QLW9 94 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 SLC1A7O00341 560 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 ENTPD6O75354 484 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 RHBDL1O75783 438 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 TFF1P04155 84 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 UBCP0CG48 685 aaKnown RBP7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L2P0CJ85 424 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L3P0CJ86 424 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L4P0CJ87 422 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L5P0CJ88 424 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L6P0CJ89 424 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L7P0CJ90 424 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 SELLP14151 372 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 ZNF19P17023 458 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-210ENST00000528441 PRTN3P24158 256 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 POU3F4P49335 361 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 TMED1Q13445 227 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 CNN3Q15417 329 aaKnown RBP7.53□□□□□ -1.2
CMTM1-210ENST00000528441 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 KLF17Q5JT82 389 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-210ENST00000528441 ZBTB37Q5TC79 503 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 MEDAGQ5VYS4 303 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 DUX4L9Q6RFH8 374 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-210ENST00000528441 FIP1L1Q6UN15 594 aaKnown RBP7.53□□□□□ -1.2
CMTM1-210ENST00000528441 ZNF841Q6ZN19 808 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 SSX6Q7RTT6 188 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 C11orf53Q8IXP5 236 aa7.53□□□□□ -1.2
CMTM1-210ENST00000528441 ELMOD2Q8IZ81 293 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms