RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 OR10AC1Q8NH08 325 aa8.78□□□□□ -1
CD44-227ENST00000528086 RHOXF1Q8NHV9 184 aa8.78□□□□□ -1
CD44-227ENST00000528086 MRI1Q9BV20 369 aa8.78□□□□□ -1
CD44-227ENST00000528086 SUCNR1Q9BXA5 334 aa8.78□□□□□ -1
CD44-227ENST00000528086 PRRG3Q9BZD7 231 aa8.78□□□□□ -1
CD44-227ENST00000528086 ELL3Q9HB65 397 aaPredicted RBP8.78□□□□□ -1
CD44-227ENST00000528086 H2AFY2Q9P0M6 372 aaPredicted RBP8.78□□□□□ -1
CD44-227ENST00000528086 ERVK-18Q9QC07 812 aa8.78□□□□□ -1
CD44-227ENST00000528086 SNX5Q9Y5X3 404 aa8.78□□□□□ -1
CD44-227ENST00000528086 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1
CD44-227ENST00000528086 IGKV1-9A0A0C4DH69 117 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 METTL15A6NJ78 407 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 ENSAO43768 121 aaKnown RBP8.77□□□□□ -1.01
CD44-227ENST00000528086 SULT1C4O75897 302 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 NRASP01111 189 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 OR12D2P58182 307 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 ERVK11-1P61568 191 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 ARF6P62330 175 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 MZT1Q08AG7 82 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 TMED1Q13445 227 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 SLC9A3R2Q15599 337 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 MICBQ29980 383 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 ODF4Q2M2E3 257 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 CDONQ4KMG0 1287 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 BCL2L15Q5TBC7 163 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 HAGHLQ6PII5 290 aaPredicted RBP8.77□□□□□ -1.01
CD44-227ENST00000528086 BTNL3Q6UXE8 466 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 BATF2Q8N1L9 274 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 BPIFB2Q8N4F0 458 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 TEX29Q8N6K0 151 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 YIPF7Q8N8F6 280 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 C8orf46Q8TAG6 207 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 TRUB1Q8WWH5 349 aaKnown RBP8.77□□□□□ -1.01
CD44-227ENST00000528086 TNFRSF14Q92956 283 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 C12orf43Q96C57 262 aaKnown RBP8.77□□□□□ -1.01
CD44-227ENST00000528086 LGALS12Q96DT0 336 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 RNFT2Q96EX2 444 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 AJUBAQ96IF1 538 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 WDFY2Q96P53 400 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 FRRS1LQ9P0K9 344 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 ENOPH1Q9UHY7 261 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 EXOGQ9Y2C4 368 aaKnown RBP8.77□□□□□ -1.01
CD44-227ENST00000528086 MYRFQ9Y2G1 1151 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1.01
CD44-227ENST00000528086 OR2AT4A6NND4 320 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 EBAG9O00559 213 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 SIGLEC5O15389 551 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 WBP4O75554 376 aaKnown RBP8.76□□□□□ -1.01
CD44-227ENST00000528086 MTRF1O75570 445 aaKnown RBP8.76□□□□□ -1.01
CD44-227ENST00000528086 ACAA1P09110 424 aaPredicted RBP8.76□□□□□ -1.01
CD44-227ENST00000528086 PGA5P0DJD9 388 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 PRTN3P24158 256 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 FPR2P25090 351 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 MPZP25189 248 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 CFPP27918 469 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 MTNR1AP48039 350 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 CEBPDP49716 269 aaPredicted RBP8.76□□□□□ -1.01
CD44-227ENST00000528086 CDC42P60953 191 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ZNF91Q05481 1191 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 IKZF1Q13422 519 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 DOC2BQ14184 412 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 KCNJ8Q15842 424 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 CLVS2Q5SYC1 327 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 PLCXD3Q63HM9 321 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 FDX2Q6P4F2 183 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ACP7Q6ZNF0 438 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 KCTD8Q6ZWB6 473 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ANGPTL5Q86XS5 388 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 FTMTQ8N4E7 242 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 C11orf42Q8N5U0 333 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 POC1AQ8NBT0 407 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ZNRF1Q8ND25 227 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 OR2G2Q8NGZ5 317 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ST8SIA4Q92187 359 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ADAT3Q96EY9 351 aaPredicted RBP8.76□□□□□ -1.01
CD44-227ENST00000528086 PELI1Q96FA3 418 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 NRIP2Q9BQI9 281 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 PCGF1Q9BSM1 259 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 DCTN5Q9BTE1 182 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 MOB1AQ9H8S9 216 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 HES4Q9HCC6 221 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 AMBNQ9NP70 447 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ABCB9Q9NP78 766 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 TRIM36Q9NQ86 728 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 FAM118AQ9NWS6 357 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 NLKQ9UBE8 527 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 ENPP5Q9UJA9 477 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 GTF2A1LQ9UNN4 478 aa8.76□□□□□ -1.01
CD44-227ENST00000528086 MEGF11A6BM72 1044 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 OR5B21A6NL26 309 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 OR4C45A6NMZ5 311 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 DHRS7CA6NNS2 312 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 E9PI62 339 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 RNASEK-C17orf49H0YIS7 233 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 SLC16A6O15403 523 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 NOS1APO75052 506 aaPredicted RBP8.75□□□□□ -1.01
CD44-227ENST00000528086 TOX4O94842 621 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 KRT8P05787 483 aa8.75□□□□□ -1.01
CD44-227ENST00000528086 DBTP11182 482 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms