RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 NXNL2Q5VZ03 156 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 C12orf73Q69YU5 71 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 STUMQ69YW2 141 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 KDM4DQ6B0I6 523 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 C11orf88Q6PI97 169 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 MEPCEQ7L2J0 689 aaKnown RBP8.64□□□□□ -1.03
CPSF1-203ENST00000527916 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 OR5A2Q8NGI9 324 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 LHX4Q969G2 390 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 MED30Q96HR3 178 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 RNF170Q96K19 258 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 TBX15Q96SF7 602 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 KRT84Q9NSB2 600 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 AURKAIP1Q9NWT8 199 aaPredicted RBP8.64□□□□□ -1.03
CPSF1-203ENST00000527916 H2AFY2Q9P0M6 372 aaPredicted RBP8.64□□□□□ -1.03
CPSF1-203ENST00000527916 ENOPH1Q9UHY7 261 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 RPUSD1Q9UJJ7 312 aaKnown RBP8.64□□□□□ -1.03
CPSF1-203ENST00000527916 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 AP4S1Q9Y587 144 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 KPTNQ9Y664 436 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 IGHV3OR15-7A0A075B7D8 119 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 NDUFB3O43676 98 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 SRSF10O75494 262 aaKnown RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 MTRF1O75570 445 aaKnown RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 FBP1P09467 338 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 FCGR1AP12314 374 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 GABRA5P31644 462 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 RIDAP52758 137 aaKnown RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 GNG3P63215 75 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 POU4F2Q12837 409 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 CDONQ4KMG0 1287 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 METAP1DQ6UB28 335 aaPredicted RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 Q6ZSR3 168 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 ZDHHC23Q8IYP9 409 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 OR4S1Q8NGB4 309 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 C8orf46Q8TAG6 207 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 FAM81AQ8TBF8 368 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 TMEM163Q8TC26 289 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 NPRL2Q8WTW4 380 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 HPSE2Q8WWQ2 592 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 RPL3LQ92901 407 aaKnown RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 RAB3IPQ96QF0 476 aaPredicted RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 CCL13Q99616 98 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 PBOV1Q9GZY1 135 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 GABARAPL1Q9H0R8 117 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 OR51I2Q9H344 312 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 FBLN5Q9UBX5 448 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 NUFIP1Q9UHK0 495 aaKnown RBP8.63□□□□□ -1.03
CPSF1-203ENST00000527916 COPS3Q9UNS2 423 aa8.63□□□□□ -1.03
CPSF1-203ENST00000527916 A0A1B0GVI7 797 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 OR5B21A6NL26 309 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 PRR32B1ATL7 298 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 RNASEK-C17orf49H0YIS7 233 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 ARF6P62330 175 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 RIPPLY1Q0D2K3 151 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF829Q3KNS6 432 aaPredicted RBP8.62□□□□□ -1.03
CPSF1-203ENST00000527916 LRRC10Q5BKY1 277 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 SLC35E4Q6ICL7 350 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF788Q6ZQV5 615 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 C1orf122Q6ZSJ8 110 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 KCTD8Q6ZWB6 473 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 GID4Q8IVV7 300 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 TCEANCQ8N8B7 351 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 ANGPTL6Q8NI99 470 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF671Q8TAW3 534 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 ST8SIA4Q92187 359 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 CNN2Q99439 309 aaKnown RBP8.62□□□□□ -1.03
CPSF1-203ENST00000527916 DCTN5Q9BTE1 182 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 OSBPL10Q9BXB5 764 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 FGF23Q9GZV9 251 aaPredicted RBP8.62□□□□□ -1.03
CPSF1-203ENST00000527916 WDR13Q9H1Z4 485 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 MOB1AQ9H8S9 216 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 CLN6Q9NWW5 311 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 RASL12Q9NYN1 266 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 DNAJB11Q9UBS4 358 aa8.62□□□□□ -1.03
CPSF1-203ENST00000527916 A0A1B0GW55 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DHRS7CA6NNS2 312 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF732B4DXR9 585 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 PSMD9O00233 223 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 SIGLEC5O15389 551 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 AKR7A2O43488 359 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 MITFO75030 526 aaPredicted RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DHRS3O75911 302 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 MPIG6BO95866 241 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 TTRP02766 147 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 MRPL3P09001 348 aaKnown RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 ACAA1P09110 424 aaPredicted RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L2P0CJ85 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L3P0CJ86 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L4P0CJ87 422 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L5P0CJ88 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L6P0CJ89 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 DUX4L7P0CJ90 424 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 EPHA2P29317 976 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 GPM6AP51674 278 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 CAV3P56539 151 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 CXCR4P61073 352 aa8.61□□□□□ -1.03
CPSF1-203ENST00000527916 EMX1Q04741 257 aaPredicted RBP8.61□□□□□ -1.03
CPSF1-203ENST00000527916 C1orf146Q5VVC0 180 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms