RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CLVS2Q5SYC1 327 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 ZBTB37Q5TC79 503 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 BATF2Q8N1L9 274 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 LHX4Q969G2 390 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 TMIGD2Q96BF3 282 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 TBX15Q96SF7 602 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 ADI1Q9BV57 179 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 CNTD2Q9H8S5 307 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 PLEKHA1Q9HB21 404 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 AASSQ9UDR5 926 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 RPUSD1Q9UJJ7 312 aaKnown RBP12.85□□□□□ -0.35
CAPN1-213ENST00000527897 TENM1Q9UKZ4 2725 aa12.85□□□□□ -0.35
CAPN1-213ENST00000527897 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 A0A1B0GTI1 187 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 OR2AT4A6NND4 320 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 NDUFB7P17568 137 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 AMY2BP19961 511 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 PRTN3P24158 256 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 HAAOP46952 286 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 IL13RA1P78552 427 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 TMED1Q13445 227 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 DEFB112Q30KQ8 113 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 C3orf56Q8N813 242 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 OR14K1Q8NGZ2 314 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 TRMT10AQ8TBZ6 339 aaKnown RBP12.84□□□□□ -0.35
CAPN1-213ENST00000527897 NPRL2Q8WTW4 380 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 TRUB1Q8WWH5 349 aaKnown RBP12.84□□□□□ -0.35
CAPN1-213ENST00000527897 AQP3Q92482 292 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 RORBQ92753 470 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 RNFT2Q96EX2 444 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 HRASLS5Q96KN8 279 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 ZNF488Q96MN9 340 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 GAFA1Q96PS6 74 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 MBOAT4Q96T53 435 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 C9orf16Q9BUW7 83 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 SLC25A10Q9UBX3 287 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-213ENST00000527897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
CAPN1-213ENST00000527897 GMPPBQ9Y5P6 360 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 V9GYS6 101 aa12.84□□□□□ -0.35
CAPN1-213ENST00000527897 DAPL1A0PJW8 107 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 TMEM89A2RUT3 159 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 SYT7O43581 403 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 SYNGR1O43759 233 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 BAG2O95816 211 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 MMP9P14780 707 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 CAPZA1P52907 286 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-213ENST00000527897 DGUOKQ16854 277 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 C9orf139Q6ZV77 190 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 CATSPERDQ86XM0 798 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 TMEM185AQ8NFB2 350 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 ANGPTL6Q8NI99 470 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 GATAD2BQ8WXI9 593 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 ITFG2Q969R8 447 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 SLC25A28Q96A46 364 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 MED30Q96HR3 178 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 C1orf147Q96MC9 270 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-213ENST00000527897 SIRPDQ9H106 197 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 ELL3Q9HB65 397 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-213ENST00000527897 S100A14Q9HCY8 104 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 ACOXLQ9NUZ1 547 aa12.83□□□□□ -0.36
CAPN1-213ENST00000527897 CENPVL3A0A0U1RRI6 287 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 FAM230AA0A1W2PPH8 454 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 A0A1W2PQ09 198 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 J3QT63 122 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 DLGAP1O14490 977 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 HOXA3O43365 443 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-213ENST00000527897 SULT1C4O75897 302 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 PSG2P11465 335 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 CFPP27918 469 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 TGM4P49221 684 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF85Q03923 595 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 PDCD1Q15116 288 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 SLC9A3R2Q15599 337 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 CDONQ4KMG0 1287 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 ATPAF1Q5TC12 328 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF788Q6ZQV5 615 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 ZBTB49Q6ZSB9 765 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 KRT74Q7RTS7 529 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 VMO1Q7Z5L0 202 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 ZNF573Q86YE8 665 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 ZNRF1Q8ND25 227 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 DCTN5Q9BTE1 182 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 DNTTIP1Q9H147 329 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 SIRT7Q9NRC8 400 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
CAPN1-213ENST00000527897 IGKV1D-17A0A075B6S4 117 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 PQLC2LA1A4F0 135 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 ANKRD61A6NGH8 418 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 SIGLEC5O15389 551 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 INMTO95050 263 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 NXPH2O95156 264 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 ACAA1P09110 424 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-213ENST00000527897 DLX1P56177 255 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 SNRPGP62308 76 aaKnown RBP12.81□□□□□ -0.36
CAPN1-213ENST00000527897 ACTC1P68032 377 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 ACTA1P68133 377 aa12.81□□□□□ -0.36
CAPN1-213ENST00000527897 MEDAGQ5VYS4 303 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms