RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 TRAF4Q9BUZ4 470 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-216ENST00000527467 CHRNA10Q9GZZ6 450 aa6.54□□□□□ -1.36
CTNND1-216ENST00000527467 TREX1Q9NSU2 369 aa6.54□□□□□ -1.36
CTNND1-216ENST00000527467 CACNG4Q9UBN1 327 aa6.54□□□□□ -1.36
CTNND1-216ENST00000527467 TCHHQ07283 1943 aa6.54□□□□□ -1.36
CTNND1-216ENST00000527467 MEIKINA0A087WXM9 373 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 A0A1W2PQU0 124 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MFSD2BA6NFX1 497 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 J3KTA2 159 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MT-CO3P00414 261 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 F11P03951 625 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 IL4P05112 153 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 DAOP14920 347 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 KLF3P57682 345 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SPATA45Q537H7 98 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MRPL2Q5T653 305 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TRAT1Q6PIZ9 186 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SPNS3Q6ZMD2 512 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MAMSTRQ6ZN01 415 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ZNF841Q6ZN19 808 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 OR8I2Q8N0Y5 310 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TMEM101Q96IK0 257 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 LCORQ96JN0 433 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 PRSS16Q9NQE7 514 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 HCFC1R1Q9NWW0 138 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 CHST2Q9Y4C5 530 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MAST2Q6P0Q8 1798 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 H3BP45 60 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 GNG10P50151 68 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 RPS23P62266 143 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MEF2CQ06413 473 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ZNF600Q6ZNG1 722 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TBC1D26Q86UD7 250 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 LRRTM3Q86VH5 581 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 DUSP18Q8NEJ0 188 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SLC35A4Q96G79 324 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TMEM56Q96MV1 263 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TEX101Q9BY14 249 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MANBALQ9NQG1 85 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 PEF1Q9UBV8 284 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 PRSS50Q9UI38 385 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ANXA10Q9UJ72 324 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 G3V2L1 256 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 DOK2O60496 412 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ABLIM3O94929 683 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 P01737 135 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 APCSP02743 223 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 RBP4P02753 201 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 PI3P19957 117 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 BRS3P32247 399 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 CIRBPQ14011 172 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ZNF385CQ66K41 422 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MRM1Q6IN84 353 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SLC25A34Q6PIV7 304 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 HTR3DQ70Z44 454 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SSX8Q7RTT4 187 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 NANOGP1Q8N7R0 232 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ZNF519Q8TB69 540 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 CPPED1Q9BRF8 314 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SMG9Q9H0W8 520 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MBD1Q9UIS9 605 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 NDRG4Q9ULP0 352 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 MOB4Q9Y3A3 225 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ANKRD31Q8N7Z5 1873 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SELENOFO60613 162 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 CD3DP04234 171 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 ARG1P05089 322 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 CD14P08571 375 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 CD46P15529 392 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 DDTP30046 118 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 SYPL1Q16563 259 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 DEFB110Q30KQ9 67 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 C18orf21Q32NC0 220 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 NKAIN1Q4KMZ8 207 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TMEM128Q5BJH2 165 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 OPALINQ96PE5 141 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 WDR83Q9BRX9 315 aaKnown RBP6.53□□□□□ -1.36
CTNND1-216ENST00000527467 C1QTNF3Q9BXJ4 246 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TXNIPQ9H3M7 391 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 TMEM167BQ9NRX6 74 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 LAMB2P55268 1798 aa6.53□□□□□ -1.36
CTNND1-216ENST00000527467 UTS2O95399 124 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 HRH1P35367 487 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 NOVP48745 357 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 PCBP3P57721 371 aaKnown RBP6.52□□□□□ -1.36
CTNND1-216ENST00000527467 PRSS8Q16651 343 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 VMA21Q3ZAQ7 101 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 UNQ6494/PRO21346Q6UXR6 183 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 OR10AG1Q8NH19 301 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 OR13C6PQ8NH95 151 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 LHFPL5Q8TAF8 219 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 RAB40CQ96S21 281 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 TAS2R4Q9NYW5 299 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 GPR45Q9Y5Y3 372 aa6.52□□□□□ -1.36
CTNND1-216ENST00000527467 RBFOX3A6NFN3 312 aa6.52□□□□□ -1.37
CTNND1-216ENST00000527467 RBFOX2O43251 390 aaKnown RBP eCLIP6.52□□□□□ -1.374e-7■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms