RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SVILO95425 2214 aa3.83□□□□□ -1.8
USP48-211ENST00000526044 CEP295Q9C0D2 2601 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 IGLV1-36A0A0B4J1U3 117 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 IGKV1D-43A0A0B4J1Z2 117 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 IRGMA1A4Y4 181 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 ZNF99A8MXY4 864 aaPredicted RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 EEF1E1-BLOC1S5C9J1V9 151 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 C16orf97H3BN30 126 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 L7N2F9 121 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 M0QZ24 198 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 M0R129 80 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 DCTN6O00399 190 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 ZNF593O00488 134 aaPredicted RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 HS3ST1O14792 307 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 EEF1E1O43324 174 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 XPNPEP2O43895 674 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 LMX1BO60663 402 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 WBP4O75554 376 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 MPZL1O95297 269 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 FARS2O95363 451 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 CRYAAP02489 173 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 OR8G3PP0DMU2 310 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 MYOD1P15172 320 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 CTLA4P16410 223 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 ACHEP22303 614 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 SLC2A5P22732 501 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 IGHV1-2P23083 117 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 HTR1FP30939 366 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 CDH11P55287 796 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 SNU13P55769 128 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 CXCR4P61073 352 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 LSM6P62312 80 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 MRPS34P82930 218 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 FMODQ06828 376 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 GAMTQ14353 236 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 SLC25A35Q3KQZ1 300 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 CDONQ4KMG0 1287 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 RBM48Q5RL73 367 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 C10orf128Q5T292 105 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 LCN1P1Q5VSP4 162 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 FAM27BQ5VT28 67 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 C9orf135Q5VTT2 229 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 METTL11BQ5VVY1 283 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 OR7E24Q6IFN5 339 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 UGT2A3Q6UWM9 527 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 B3GLCTQ6Y288 498 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 GLDNQ6ZMI3 551 aaPredicted RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 CFAP77Q6ZQR2 320 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 Q6ZT83 130 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 LUZP2Q86TE4 346 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 SKA3Q8IX90 412 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 CCDC36Q8IYA8 594 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 GABRG1Q8N1C3 465 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 LRRC18Q8N456 261 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 ZNF433Q8N7K0 673 aaPredicted RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 BBS1Q8NFJ9 593 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 BPIFB6Q8NFQ5 453 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 OR13A1Q8NGR1 328 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 OR6K6Q8NGW6 343 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 OCC1Q8TAD7 63 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 THAP6Q8TBB0 222 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 CNIH3Q8TBE1 160 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 APH1BQ8WW43 257 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 C11orf40Q8WZ69 217 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 TMEM186Q96B77 213 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 FOXN4Q96NZ1 517 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 HCAR1Q9BXC0 346 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 YTHDF1Q9BYJ9 559 aaKnown RBP3.82□□□□□ -1.8
USP48-211ENST00000526044 RACGAP1Q9H0H5 632 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 RNF121Q9H920 327 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 SIAEQ9HAT2 523 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 AMBNQ9NP70 447 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 PLCXD1Q9NUJ7 323 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 TMEM38BQ9NVV0 291 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 SCN3BQ9NY72 215 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 TAS2R16Q9NYV7 291 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 DNAJC27Q9NZQ0 273 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 OR14J1Q9UGF5 321 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 TPRKBQ9Y3C4 175 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 UGT2A1Q9Y4X1 527 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 BSNQ9UPA5 3926 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 FREM1Q5H8C1 2179 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 ESPL1Q14674 2120 aa3.82□□□□□ -1.8
USP48-211ENST00000526044 DSPP15924 2871 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 CHD8Q9HCK8 2581 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 A0A0B4J293 547 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 CCDC182A6NF36 153 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 TVP23AA6NH52 213 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 C12orf71A8MTZ7 269 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 J3QKU1 62 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ZZEF1O43149 2961 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 ZG16O60844 167 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 LYZL6O75951 148 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 FADS2O95864 444 aaKnown RBP3.81□□□□□ -1.8
USP48-211ENST00000526044 CST2P09228 141 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 SBK2P0C263 348 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 OR2T7P0C7T2 308 aa3.81□□□□□ -1.8
USP48-211ENST00000526044 DBTP11182 482 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms