RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 C1orf229Q6ZS94 237 aaPredicted RBP9.54□□□□□ -0.88
CTTN-209ENST00000525276 C8orf59Q8N0T1 100 aaPredicted RBP9.54□□□□□ -0.88
CTTN-209ENST00000525276 TEX29Q8N6K0 151 aa9.54□□□□□ -0.88
CTTN-209ENST00000525276 SCCPDHQ8NBX0 429 aa9.54□□□□□ -0.88
CTTN-209ENST00000525276 SGMS2Q8NHU3 365 aa9.54□□□□□ -0.88
CTTN-209ENST00000525276 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
CTTN-209ENST00000525276 JAM3Q9BX67 310 aa9.54□□□□□ -0.88
CTTN-209ENST00000525276 OR51I2Q9H344 312 aa9.54□□□□□ -0.88
CTTN-209ENST00000525276 FGF20Q9NP95 211 aaPredicted RBP9.54□□□□□ -0.88
CTTN-209ENST00000525276 GPR173Q9NS66 373 aa9.54□□□□□ -0.88
CTTN-209ENST00000525276 POLR3KQ9Y2Y1 108 aaPredicted RBP9.54□□□□□ -0.88
CTTN-209ENST00000525276 WNK2Q9Y3S1 2297 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 IGHV3OR15-7A0A075B7D8 119 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 A0A0A6YYJ9 748 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 ANKRD61A6NGH8 418 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 SRRM5B3KS81 715 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 H3BSH0 61 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 ADAM20O43506 726 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 GATBO75879 557 aaKnown RBP9.53□□□□□ -0.88
CTTN-209ENST00000525276 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
CTTN-209ENST00000525276 ISG15P05161 165 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 MUC1P15941 1255 aaPredicted RBP9.53□□□□□ -0.88
CTTN-209ENST00000525276 DCKP27707 260 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 GBX2P52951 348 aaPredicted RBP9.53□□□□□ -0.88
CTTN-209ENST00000525276 NANOS3P60323 173 aaKnown RBP9.53□□□□□ -0.88
CTTN-209ENST00000525276 MICBQ29980 383 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 HAVCR2Q8TDQ0 301 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 TECTBQ96PL2 329 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 ZNF649Q9BS31 505 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 ISG20L2Q9H9L3 353 aaKnown RBP9.53□□□□□ -0.88
CTTN-209ENST00000525276 FRRS1LQ9P0K9 344 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 ERVK-18Q9QC07 812 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 CLN8Q9UBY8 286 aa9.53□□□□□ -0.88
CTTN-209ENST00000525276 PQLC2LA1A4F0 135 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 A6NIN4 97 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 OR4C45A6NMZ5 311 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 H0YJX3 145 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 TRAPPC2LH3BP13 241 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 TNFRSF13BO14836 293 aaPredicted RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 SERPINA3P01011 423 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 AVPP01185 164 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 GYPAP02724 150 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 RPSAP08865 295 aaKnown RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 GNAO1P09471 354 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 CCDC159P0C7I6 412 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 LIMS3P0CW19 117 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 LIMS4P0CW20 117 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 MYL12AP19105 171 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 NPY4RP50391 375 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 MED21Q13503 144 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 ALKBH1Q13686 389 aaKnown RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 DMRTC1Q5HYR2 192 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 PRR31Q5SQ13 230 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 WDR25Q64LD2 544 aaPredicted RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 HAGHLQ6PII5 290 aaPredicted RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 ZNF573Q86YE8 665 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 RDH10Q8IZV5 341 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 ZNF676Q8N7Q3 588 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 ZNF671Q8TAW3 534 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 FAM216AQ8WUB2 273 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 NRG4Q8WWG1 115 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 TFAP2CQ92754 450 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 C12orf43Q96C57 262 aaKnown RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 TMPRSS13Q9BYE2 586 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 CHST5Q9GZS9 411 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 VCX3BQ9H321 246 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 C7orf69Q9H7B7 122 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 MMP26Q9NRE1 261 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 DNAJB11Q9UBS4 358 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 METRNQ9UJH8 293 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 HHLA2Q9UM44 414 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 DIMT1Q9UNQ2 313 aaKnown RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 SLC7A11Q9UPY5 501 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 EXOSC1Q9Y3B2 195 aaKnown RBP9.52□□□□□ -0.89
CTTN-209ENST00000525276 INSIG2Q9Y5U4 225 aa9.52□□□□□ -0.89
CTTN-209ENST00000525276 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 J3QT63 122 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 AKR7A2O43488 359 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 RHBDL1O75783 438 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 ZNF20P17024 532 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 HAAOP46952 286 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 TGM4P49221 684 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 HILS1P60008 231 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 GMFBP60983 142 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 ACTG1P63261 375 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 SCGB2A2Q13296 93 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 CNN3Q15417 329 aaKnown RBP9.51□□□□□ -0.89
CTTN-209ENST00000525276 PDLIM3Q53GG5 364 aaPredicted RBP9.51□□□□□ -0.89
CTTN-209ENST00000525276 BTNL3Q6UXE8 466 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 TMPRSS11AQ6ZMR5 421 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 ZNF841Q6ZN19 808 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 SLC36A1Q7Z2H8 476 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 C3orf56Q8N813 242 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 FBLIM1Q8WUP2 373 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 RAB40AQ8WXH6 277 aa9.51□□□□□ -0.89
CTTN-209ENST00000525276 PP6455Q8WZ26 134 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms