RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 AP2A2O94973 939 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SNAP29O95721 258 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 HPRP00739 348 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 IFNA5P01569 189 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TFPTP0C1Z6 253 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CT62P0C5K7 136 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 RFPL3SP0C7P2 107 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PET100P0DJ07 73 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 GABRA1P14867 456 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 UGT2B7P16662 529 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 HLA-GP17693 338 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 USF1P22415 310 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 HRH2P25021 359 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 HTR2CP28335 458 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SRD5A2P31213 254 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SRP14P37108 136 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TALDO1P37837 337 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 OMPP47874 163 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SPINT3P49223 89 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CDK9P50750 372 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF84P51523 738 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 RIDAP52758 137 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 UBE2KP61086 200 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 LSM6P62312 80 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 STX4Q12846 297 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SELENBP1Q13228 472 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 GTF2H2Q13888 395 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TSNQ15631 228 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ATP6AP1Q15904 470 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 NRF1Q16656 503 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CYP51A1Q16850 503 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PGGHGQ32M88 737 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 RUSC1-AS1Q66K80 236 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 GLYATQ6IB77 296 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 NANOGP8Q6NSW7 305 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 GTF2H2CQ6P1K8 395 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 DHRS4L2Q6PKH6 230 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TMPRSS11AQ6ZMR5 421 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 MBOAT1Q6ZNC8 495 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CPEB2Q7Z5Q1 589 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CARM1Q86X55 608 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 C9orf106Q8NAJ2 232 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF555Q8NEP9 628 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 OR8J3Q8NGG0 315 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 OR2D3Q8NGH3 330 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 OR52E4Q8NGH9 312 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 OR4A4PQ8NGN8 299 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF420Q8TAQ5 688 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 LGALS14Q8TCE9 139 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 EEF1AKMT1Q8WVE0 214 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CANT1Q8WVQ1 401 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SSMEM1Q8WWF3 244 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 SNAPC3Q92966 411 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ABTB1Q969K4 478 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 NTNG2Q96CW9 530 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PRAP1Q96NZ9 151 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 BIRC8Q96P09 236 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 NEURL2Q9BR09 285 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF426Q9BUY5 554 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 RAB11FIP5Q9BXF6 653 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 TTTY12Q9BZ98 90 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 DPY30Q9C005 99 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 METTL9Q9H1A3 318 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PIGUQ9H490 435 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 METTL17Q9H7H0 456 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 NANOGQ9H9S0 305 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PLGRKTQ9HBL7 147 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 CYSLTR2Q9NS75 346 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ACSS1Q9NUB1 689 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PLEKHJ1Q9NW61 149 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 NDRG3Q9UGV2 375 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 PCTPQ9UKL6 214 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 KLF13Q9Y2Y9 288 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 POLR3HQ9Y535 204 aaPredicted RBP4.33□□□□□ -1.72
PABPC1-223ENST00000523636 ORC6Q9Y5N6 252 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
PABPC1-223ENST00000523636 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 A0A1W2PNV4 684 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 A0A1W2PPV9 198 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SLC5A10A0PJK1 596 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF729A6NN14 1252 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 F8W036 122 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CCL22O00626 93 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 NME4O00746 187 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SYNGR3O43761 229 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CHST1O43916 411 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 PRKRAO75569 313 aaKnown RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SLC25A14O95258 325 aaPredicted RBP4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CLDN9O95484 217 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 TXNDC12O95881 172 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 NUDT3O95989 172 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SMIM18P0DKX4 95 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 CDH1P12830 882 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 SLC25A16P16260 332 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF43P17038 809 aa4.32□□□□□ -1.72
PABPC1-223ENST00000523636 IL1RNP18510 177 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms