RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SERPINI2O75830 405 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 RPSAP08865 295 aaKnown RBP5.37□□□□□ -1.55
SDCBP-210ENST00000522843 EPHA2P29317 976 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 APLNRP35414 380 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 PSMB10P40306 273 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 SLC9A3P48764 834 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 DLX1P56177 255 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 COPZ1P61923 177 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 PPP1CBP62140 327 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 CD47Q08722 323 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 ZIK1Q3SY52 487 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-210ENST00000522843 DMRTC1Q5HYR2 192 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 SLX4IPQ5VYV7 408 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 C12orf73Q69YU5 71 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 RPL13AP3Q6NVV1 102 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 MZT2AQ6P582 158 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 C5orf46Q6UWT4 87 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF730Q6ZMV8 503 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 RRM2BQ7LG56 351 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 NDUFA11Q86Y39 141 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 LRRC18Q8N456 261 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 OR9Q2Q8NGE9 314 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 AKR7LQ8NHP1 331 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 TMEM239Q8WW34 195 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 CYGBQ8WWM9 190 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 MUL1Q969V5 352 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 PLEKHA8Q96JA3 519 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 CNBD2Q96M20 576 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 SLC25A19Q9HC21 320 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 KRCC1Q9NPI7 259 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-210ENST00000522843 ETAA1Q9NY74 926 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 RHCGQ9UBD6 479 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 IL19Q9UHD0 177 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 RPUSD1Q9UJJ7 312 aaKnown RBP5.37□□□□□ -1.55
SDCBP-210ENST00000522843 SLC7A7Q9UM01 511 aa5.37□□□□□ -1.55
SDCBP-210ENST00000522843 IGKV1D-43A0A0B4J1Z2 117 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 ANKRD61A6NGH8 418 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 CPSF4LA6NMK7 179 aaKnown RBP5.36□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF726A6NNF4 738 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 F5H697 171 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 H3BSA7 217 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 WBP4O75554 376 aaKnown RBP5.36□□□□□ -1.55
SDCBP-210ENST00000522843 FSTL3O95633 263 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PTHP01270 115 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 HMGN1P05114 100 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 TFAP2AP05549 437 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 QDPRP09417 244 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 NHLRC4P0CG21 123 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PGA4P0DJD7 388 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PGA3P0DJD8 388 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF32P17041 273 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 AHCYP23526 432 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 CRHBPP24387 322 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 UGT2B15P54855 530 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 GABARAPL2P60520 117 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 CDC42P60953 191 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 ARF6P62330 175 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PSG4Q00888 419 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 EMX1Q04741 257 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PUDPQ08623 228 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 FHL1Q13642 323 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PMS2P11Q13670 270 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 APOFQ13790 326 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 MELKQ14680 651 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 HIST3H3Q16695 136 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 SLC36A2Q495M3 483 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 ALG10BQ5I7T1 473 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 FGD3Q5JSP0 725 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 MEDAGQ5VYS4 303 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 RNLSQ5VYX0 342 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PXKQ7Z7A4 578 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 NRMQ8IXM6 262 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 PNKDQ8N490 385 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 SCCPDHQ8NBX0 429 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 OR4F17Q8NGA8 305 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 OR8J1Q8NGP2 316 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 OR6X1Q8NH79 312 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 SPSB4Q96A44 273 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 NABP1Q96AH0 204 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 OR4F4Q96R69 305 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 WNT5BQ9H1J7 359 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 MEPEQ9NQ76 525 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-210ENST00000522843 SERTAD4Q9NUC0 356 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 FKBP14Q9NWM8 211 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 NDUFA13Q9P0J0 144 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 KIF17Q9P2E2 1029 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 BAIAP2Q9UQB8 552 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 MED31Q9Y3C7 131 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 UGT2A1Q9Y4X1 527 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 GMPPBQ9Y5P6 360 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 HECTD4Q9Y4D8 3996 aa5.36□□□□□ -1.55
SDCBP-210ENST00000522843 A0A087WWL8 130 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 A0A087WXM4 84 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 C11orf98E9PRG8 122 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 IMPA2O14732 288 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 ARPC3O15145 178 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 IDH3BO43837 385 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 CHST1O43916 411 aa5.35□□□□□ -1.55
SDCBP-210ENST00000522843 FARS2O95363 451 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms