RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 C12orf10Q9HB07 376 aa3.13□□□□□ -1.91
SKP1-209ENST00000522552 DNAJC27Q9NZQ0 273 aa3.13□□□□□ -1.91
SKP1-209ENST00000522552 CLCF1Q9UBD9 225 aa3.13□□□□□ -1.91
SKP1-209ENST00000522552 TP53TG5Q9Y2B4 290 aa3.13□□□□□ -1.91
SKP1-209ENST00000522552 IGLV4-3A0A075B6K6 122 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 IGHV3-16A0A0C4DH30 117 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 MFNGO00587 321 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 STX10O60499 249 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 PTHP01270 115 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 GKN3PP0CG01 181 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 CCNE1P24864 410 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 FMO3P31513 532 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 PPOXP50336 477 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 CRYBA4P53673 196 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 LINC01547P58512 204 aaPredicted RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 MTPNP58546 118 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 PFN3P60673 137 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 RPS21P63220 83 aaKnown RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 ZNF235Q14590 738 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 QPRTQ15274 297 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 LRRC36Q1X8D7 754 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 CLEC12BQ2HXU8 276 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 CDNFQ49AH0 187 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 ADAMTSL4-AS1Q5T5F5 129 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 C1orf146Q5VVC0 180 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 LCN12Q6JVE5 192 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 ZNF530Q6P9A1 599 aaPredicted RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 ZNF771Q7L3S4 317 aaPredicted RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 C1QL2Q7Z5L3 287 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 C11orf72Q8NBR9 251 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 OR51D1Q8NGF3 324 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 RASSF5Q8WWW0 418 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 RPL36ALQ969Q0 106 aaKnown RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 GMPPAQ96IJ6 420 aaPredicted RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 DUX3Q96PT4 197 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 MRIQ9BWK5 157 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 OR51I1Q9H343 314 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 DDX19AQ9NUU7 478 aaKnown RBP3.12□□□□□ -1.91
SKP1-209ENST00000522552 VPS29Q9UBQ0 182 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 KLHL21Q9UJP4 597 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 CPDO75976 1380 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 DYSFO75923 2080 aa3.12□□□□□ -1.91
SKP1-209ENST00000522552 TRAV9-2A0A087WT02 112 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 A0A1B0GV72 72 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CA11O75493 328 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CST2P09228 141 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CD99P14209 185 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CD36P16671 472 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 AKR1C4P17516 323 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 HTR1EP28566 365 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ADORA1P30542 326 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 GCLMP48507 274 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 MNAT1P51948 309 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 NDUFA8P51970 172 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 HMGA2P52926 109 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ERVFC1-1P60608 527 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 RPS23P62266 143 aaKnown RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 CD300CQ08708 224 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 C9orf66Q5T8R8 295 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 STEAP4Q687X5 459 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ZNF544Q6NX49 715 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 RASSF6Q6ZTQ3 369 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 FAM183BPQ6ZVS7 135 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 OAFQ86UD1 273 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 COMMD7Q86VX2 200 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CATSPER3Q86XQ3 398 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 FAM71E2Q8N5Q1 922 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 NEIL3Q8TAT5 605 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 MRGPRDQ8TDS7 321 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 SLC37A2Q8TED4 501 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 BLNKQ8WV28 456 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 RGP1Q92546 391 aaPredicted RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 IL22RA2Q969J5 263 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 SMIM12Q96EX1 92 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 BIRC8Q96P09 236 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 FAAP24Q9BTP7 215 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 C6orf62Q9GZU0 229 aaPredicted RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 PCBD2Q9H0N5 130 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ZBP1Q9H171 429 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 DEFB127Q9H1M4 99 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 FBXL15Q9H469 300 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 VSIRQ9H7M9 311 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ZNF629Q9UEG4 869 aaPredicted RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
SKP1-209ENST00000522552 ORC6Q9Y5N6 252 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 SLC22A7Q9Y694 548 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 CAMSAP1Q5T5Y3 1602 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 IGHV3OR16-9A0A0B4J2B5 98 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 RBFOX3A6NFN3 312 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 EVPLLA8MZ36 301 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 H0Y9J4 135 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 FGF17O60258 216 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 NPIPB7O75200 414 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 SNAPINO95295 136 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 HAND1O96004 215 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 THY1P04216 161 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 MMP7P09237 267 aaPredicted RBP3.11□□□□□ -1.91
SKP1-209ENST00000522552 CSF3P09919 207 aa3.11□□□□□ -1.91
SKP1-209ENST00000522552 ZSCAN5DPP0CG00 497 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms