RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR52I1Q8NGK6 324 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 C12orf43Q96C57 262 aaKnown RBP17.16■□□□□ 0.34
TRIM35-203ENST00000521253 PELI1Q96FA3 418 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 CCL13Q99616 98 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 NUDT16L1Q9BRJ7 211 aaKnown RBP17.16■□□□□ 0.34
TRIM35-203ENST00000521253 ZNF649Q9BS31 505 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 OCEL1Q9H607 264 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 PLEKHA1Q9HB21 404 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 SNTG1Q9NSN8 517 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 FRRS1LQ9P0K9 344 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 DNAJB11Q9UBS4 358 aa17.16■□□□□ 0.34
TRIM35-203ENST00000521253 KIR2DS1A0A191URI9 304 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 A0A1B0GW55 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 ANKRD61A6NGH8 418 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L2P0CJ85 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L3P0CJ86 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L4P0CJ87 422 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L5P0CJ88 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L6P0CJ89 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L7P0CJ90 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 ADARB1P78563 741 aaKnown RBP17.15■□□□□ 0.34
TRIM35-203ENST00000521253 SCGB2A2Q13296 93 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 STUMQ69YW2 141 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4L9Q6RFH8 374 aaPredicted RBP17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DHRSXQ8N5I4 330 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 CCDC54Q8NEL0 328 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 OR5T2Q8NGG2 359 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 CNIH3Q8TBE1 160 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 AQP3Q92482 292 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 MRPL48Q96GC5 212 aaKnown RBP17.15■□□□□ 0.34
TRIM35-203ENST00000521253 ISG20L2Q9H9L3 353 aaKnown RBP17.15■□□□□ 0.34
TRIM35-203ENST00000521253 INPP5EQ9NRR6 644 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 ERVK13-1Q9NX77 482 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 DUX4Q9UBX2 424 aa17.15■□□□□ 0.34
TRIM35-203ENST00000521253 PQLC2LA1A4F0 135 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 RNF212BA8MTL3 300 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 DVL1O14640 695 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 TCF21O43680 179 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 HTR1AP08908 422 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 AMY2BP19961 511 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 KLHL22Q53GT1 634 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 CD276Q5ZPR3 534 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF573Q86YE8 665 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 SYS1Q8N2H4 156 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 FAM216BQ8N7L0 139 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF671Q8TAW3 534 aa17.14■□□□□ 0.33
TRIM35-203ENST00000521253 ENSAO43768 121 aaKnown RBP17.13■□□□□ 0.33
TRIM35-203ENST00000521253 GLRA1P23415 457 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 HAAOP46952 286 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 CCR9P51686 369 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 ARMCX4Q5H9R4 360 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 KLF17Q5JT82 389 aaPredicted RBP17.13■□□□□ 0.33
TRIM35-203ENST00000521253 ATPAF1Q5TC12 328 aaPredicted RBP17.13■□□□□ 0.33
TRIM35-203ENST00000521253 TMEM244Q5VVB8 128 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 SLC36A1Q7Z2H8 476 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 FGFRL1Q8N441 504 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 TMEM158Q8WZ71 300 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
TRIM35-203ENST00000521253 CHST5Q9GZS9 411 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 DCLRE1BQ9H816 532 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 NLKQ9UBE8 527 aa17.13■□□□□ 0.33
TRIM35-203ENST00000521253 ERICH4A6NGS2 130 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 OR4C45A6NMZ5 311 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 J3QT63 122 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 SYNGR1O43759 233 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 TFF1P04155 84 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 ISG15P05161 165 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 LIMS3P0CW19 117 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 LIMS4P0CW20 117 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 PPIAL4GP0DN37 164 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 UBE2V2Q15819 145 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 KRTAP24-1Q3LI83 254 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 SETD9Q8NE22 299 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 ANGPTL6Q8NI99 470 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 TRMT10AQ8TBZ6 339 aaKnown RBP17.12■□□□□ 0.33
TRIM35-203ENST00000521253 NPRL2Q8WTW4 380 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 ST8SIA4Q92187 359 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 FGF20Q9NP95 211 aaPredicted RBP17.12■□□□□ 0.33
TRIM35-203ENST00000521253 NKX1-2Q9UD57 310 aaPredicted RBP17.12■□□□□ 0.33
TRIM35-203ENST00000521253 STAB1Q9NY15 2570 aa17.12■□□□□ 0.33
TRIM35-203ENST00000521253 DOCK11Q5JSL3 2073 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 GATBO75879 557 aaKnown RBP17.11■□□□□ 0.33
TRIM35-203ENST00000521253 RGS9O75916 674 aaPredicted RBP17.11■□□□□ 0.33
TRIM35-203ENST00000521253 GNAO1P09471 354 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 SELLP14151 372 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 CAPGP40121 348 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 TGM4P49221 684 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 IKZF1Q13422 519 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 IL18R1Q13478 541 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 ALKBH1Q13686 389 aaKnown RBP17.11■□□□□ 0.33
TRIM35-203ENST00000521253 BTN2A1Q7KYR7 527 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 EGFL6Q8IUX8 553 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 POC1AQ8NBT0 407 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 C22orf15Q8WYQ4 148 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 TMIGD2Q96BF3 282 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 UPRTQ96BW1 309 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 C10orf35Q96D05 121 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 ADAT3Q96EY9 351 aaPredicted RBP17.11■□□□□ 0.33
TRIM35-203ENST00000521253 ZNF488Q96MN9 340 aa17.11■□□□□ 0.33
TRIM35-203ENST00000521253 JAM3Q9BX67 310 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms