RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ZNF728P0DKX0 622 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 BLKP51451 505 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF41P51814 821 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 NHLH2Q02577 135 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 KISS1Q15726 138 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 PCK2Q16822 640 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 APCDD1LQ8NCL9 501 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 RTN4IP1Q8WWV3 396 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 RLN3Q8WXF3 142 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 ASB10Q8WXI3 467 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 DDIT4LQ96D03 193 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 CHST11Q9NPF2 352 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 UFSP2Q9NUQ7 469 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 PARPBPQ9NWS1 579 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 IGHV5-51A0A0C4DH38 117 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 BLACEA4D250 179 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 CYB5BO43169 146 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 PHF1O43189 567 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 ANGPTL7O43827 346 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FOLR2P14207 255 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 AGAP20933 346 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FBLP22087 321 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 FCARP24071 287 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 HERV-K104P61576 105 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 AKR1C8PQ5T2L2 129 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 NSUN5P2Q63ZY6 315 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 C20orf196Q8IYI0 205 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 SLC25A43Q8WUT9 341 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 RARRES2Q99969 163 aa11.32□□□□□ -0.6
TRAPPC9-208ENST00000520857 OR5AC1P0C628 307 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 CFPP27918 469 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 CDCP2Q5VXM1 449 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 LRRC18Q8N456 261 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 RNASE11Q8TAA1 199 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 RNF122Q9H9V4 155 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 SRPK3Q9UPE1 567 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 IGHG1P01857 330 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 GUSBP08236 651 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 PRF1P14222 555 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF43P17038 809 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 TUBG1P23258 451 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 CSNK1EP49674 416 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 C9orf40Q8IXQ3 194 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 UBAC2Q8NBM4 344 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 GPBAR1Q8TDU6 330 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 MEGF10Q96KG7 1140 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 WWTR1Q9GZV5 400 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 MAGT1Q9H0U3 335 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 SLC7A11Q9UPY5 501 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 ST8SIA3O43173 380 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 GATCO43716 136 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 HPNP05981 417 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 IFI6P09912 130 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 RSPO4Q2I0M5 234 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 LANCL3Q6ZV70 420 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 C1QL2Q7Z5L3 287 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
TRAPPC9-208ENST00000520857 SHANK1Q9Y566 2161 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 DEDDO75618 318 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 KLK3P07288 261 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 KLK2P20151 261 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 DCAF7P61962 342 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 FAM3AP98173 230 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 FOXF1Q12946 379 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 DEFB133Q30KQ1 61 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 METTL7AQ9H8H3 244 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 UNKLQ9H9P5 680 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 DOK5Q9P104 306 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 PPP4R1LQ9P1A2 415 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF724A8MTY0 619 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 PRAMEF26H0Y7S4 382 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 MS4A18H0YCH9 400 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 HSPA12AO43301 675 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 HEXBP07686 556 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 FABP4P15090 132 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 MTCP1P56278 107 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 IGLV3-21P80748 117 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 PDCD1Q15116 288 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 MS4A18Q3C1V0 323 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 AADACL3Q5VUY0 350 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 SLC22A18ASQ8N1D0 253 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 MR1Q95460 341 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 SERINC1Q9NRX5 453 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 OBP2AQ9NY56 170 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 AK3Q9UIJ7 227 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 UBE2J1Q9Y385 318 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 CLDN16Q9Y5I7 305 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 FBP1P09467 338 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 RNF224P0DH78 156 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 MPZP25189 248 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 RAB1AP62820 205 aa11.3□□□□□ -0.6
TRAPPC9-208ENST00000520857 HSD11B2P80365 405 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms