RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 BDKRB2P30411 391 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 RBMXP38159 391 aaKnown RBP12.95□□□□□ -0.34
LSM1-203ENST00000520755 CD200P41217 278 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 GPM6AP51674 278 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 TMBIM6P55061 237 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 OR10A3P58181 314 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 PPP3R1P63098 170 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 TESK1Q15569 626 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 PRAMEF6Q5VXH4 476 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 PRSS57Q6UWY2 283 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 NDNFQ8TB73 568 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 RAB2BQ8WUD1 216 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 ITLN1Q8WWA0 313 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 MEGF10Q96KG7 1140 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 Q96MF0 132 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 TECTBQ96PL2 329 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 TCF7L1Q9HCS4 588 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 ABCB9Q9NP78 766 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 SNTG1Q9NSN8 517 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 TREM2Q9NZC2 230 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 CKLFQ9UBR5 152 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 GSTK1Q9Y2Q3 226 aa12.95□□□□□ -0.34
LSM1-203ENST00000520755 NOP16Q9Y3C1 178 aaKnown RBP12.95□□□□□ -0.34
LSM1-203ENST00000520755 IGHV1-69-2A0A0G2JMI3 117 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 FAM230AA0A1W2PPH8 454 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 A6NHS1 94 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 OR5B21A6NL26 309 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 ZNF732B4DXR9 585 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 CD37P11049 281 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 MYL9P24844 172 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 COL8A2P25067 703 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 SDC2P34741 201 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 MTNR1BP49286 362 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 SRP9P49458 86 aaKnown RBP12.94□□□□□ -0.34
LSM1-203ENST00000520755 PDLIM4P50479 330 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 ZNF154Q13106 437 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 SPCS2Q15005 226 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 DDI2Q5TDH0 399 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 OR5A2Q8NGI9 324 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 OR8S1Q8NH09 359 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 ZNF420Q8TAQ5 688 aaPredicted RBP12.94□□□□□ -0.34
LSM1-203ENST00000520755 FAM168AQ92567 244 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 RDH5Q92781 318 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 YIPF5Q969M3 257 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 C12orf43Q96C57 262 aaKnown RBP12.94□□□□□ -0.34
LSM1-203ENST00000520755 RNF170Q96K19 258 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 BCL7BQ9BQE9 202 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 RTL8AQ9BWD3 113 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 MYOZ1Q9NP98 299 aaPredicted RBP12.94□□□□□ -0.34
LSM1-203ENST00000520755 TMEM138Q9NPI0 162 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 IL19Q9UHD0 177 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 AK6Q9Y3D8 172 aaKnown RBP12.94□□□□□ -0.34
LSM1-203ENST00000520755 TEX15Q9BXT5 2789 aa12.94□□□□□ -0.34
LSM1-203ENST00000520755 VPS13CQ709C8 3753 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 MYO9AB2RTY4 2548 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
LSM1-203ENST00000520755 SMIM31A0A1B0GVY4 71 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 ALDOBP05062 364 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 HCKP08631 526 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 CSF3P09919 207 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 TNFRSF1AP19438 455 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 PRKACBP22694 351 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 FUT6P51993 359 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 CAV3P56539 151 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 DSCR9P59020 149 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 ZP1P60852 638 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 GNG3P63215 75 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 MPPED2Q15777 294 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 FAM76BQ5HYJ3 339 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 CALHM1Q8IU99 346 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 TGIF2LYQ8IUE0 185 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 C11orf53Q8IXP5 236 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 NKAIN3Q8N8D7 197 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 RFT1Q96AA3 541 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 MICU1Q9BPX6 476 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 TLNRD1Q9H1K6 362 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 OR51I2Q9H344 312 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
LSM1-203ENST00000520755 IGHV4-30-2A0A087WSY4 118 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 TRIM64BA6NI03 449 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 CDRT1O95170 752 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 GATA4P43694 442 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 SERPINB10P48595 397 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 MXD1Q05195 221 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 KISS1Q15726 138 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 HFEQ30201 348 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 DNM1P46Q6ZS02 220 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 LHFPL2Q6ZUX7 228 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 SPERTQ8NA61 448 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 OR5D18Q8NGL1 313 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 C10orf105Q8TEF2 133 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 CCL17Q92583 94 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 BORCS8Q96FH0 119 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 SLITRK2Q9H156 845 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 METTL17Q9H7H0 456 aaPredicted RBP12.92□□□□□ -0.34
LSM1-203ENST00000520755 RSL24D1Q9UHA3 163 aaKnown RBP12.92□□□□□ -0.34
LSM1-203ENST00000520755 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
LSM1-203ENST00000520755 LRP5LA4QPB2 252 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms