RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 RIMS3Q9UJD0 308 aa4.8□□□□□ -1.64
CTNNA1-219ENST00000520158 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
CTNNA1-219ENST00000520158 HIF3AQ9Y2N7 669 aa4.8□□□□□ -1.64
CTNNA1-219ENST00000520158 DYSFO75923 2080 aa4.8□□□□□ -1.64
CTNNA1-219ENST00000520158 TANC2Q9HCD6 1990 aa4.8□□□□□ -1.64
CTNNA1-219ENST00000520158 LOC100509620A0A075B734 347 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PLSCR5A0PG75 271 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 A6NIZ1 184 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 BLOC1S5-TXNDC5H3BN57 136 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 I3L521 148 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FXYD1O00168 92 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 LGALS8O00214 317 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CCSO14618 274 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PPIHO43447 177 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PLPP2O43688 288 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ZNF780AO75290 641 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 EIF3GO75821 320 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 TUSC2O75896 110 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 GLCEO94923 617 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 TNFAIP8O95379 198 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FSTL3O95633 263 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 IGHV2-5P01817 119 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PPBPP02775 128 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 OPN1SWP03999 348 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 F13BP05160 661 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 MELTFP08582 738 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CST2P09228 141 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CSF1P09603 554 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FAM157BP0CG42 384 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CALCBP10092 127 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ZNF26P17031 533 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ADRA2CP18825 462 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FPR3P25089 353 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 KDELR2P33947 212 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 APLNRP35414 380 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 DDOSTP39656 456 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 AQP2P41181 271 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SRP9P49458 86 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 NPY4RP50391 375 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ATP5IP56385 69 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CLRN1P58418 232 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RPL27P61353 136 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PCBD1P61457 104 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ERVS71-1P61550 626 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SELENOWP63302 87 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 BLOC1S1P78537 153 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PSG4Q00888 419 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ST3GAL3Q11203 375 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CDK5R2Q13319 367 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FHL1Q13642 323 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PMS2P11Q13670 270 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CCNIQ14094 377 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 MELKQ14680 651 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 MED22Q15528 200 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SNAPC1Q16533 368 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 NKPD1Q17RQ9 610 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RFX4Q33E94 735 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 HSD17B12Q53GQ0 312 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PABPC1L2AQ5JQF8 200 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 TMEM255AQ5JRV8 349 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SLC35D3Q5M8T2 416 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FAHD2BQ6P2I3 314 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 IZUMO2Q6UXV1 221 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 C12orf54Q6X4T0 127 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ZNF101Q8IZC7 436 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ARRDC1Q8N5I2 433 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RBM15BQ8NDT2 890 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 OR4M2Q8NGB6 313 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 OR1J1Q8NGS3 322 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SGMS2Q8NHU3 365 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 TMEM255BQ8WV15 326 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SFT2D1Q8WV19 159 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 C10orf82Q8WW14 230 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RAB1CQ92928 201 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 MCUR1Q96AQ8 359 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 LRRC58Q96CX6 371 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RAB39BQ96DA2 213 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ZMYND19Q96E35 227 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ELMOD3Q96FG2 381 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 NUDT11Q96G61 164 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FAHD2AQ96GK7 314 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 SAMD8Q96LT4 415 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RBP7Q96R05 134 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 JMJD8Q96S16 334 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 CITED1Q99966 193 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 IFT27Q9BW83 186 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 YTHDF1Q9BYJ9 559 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 VCX2Q9H322 139 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RGCCQ9H4X1 137 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 METTL17Q9H7H0 456 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 RNF121Q9H920 327 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 ABCB10Q9NRK6 738 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 PLEK2Q9NYT0 353 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 OPN4Q9UHM6 478 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 FZR1Q9UM11 496 aa4.79□□□□□ -1.64
CTNNA1-219ENST00000520158 A4GNTQ9UNA3 340 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms