RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CDC14BO60729 498 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 OR2J2O76002 312 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 STK17BO94768 372 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 SIX6O95475 246 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 DUS4LO95620 317 aaKnown RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 IGHEP01854 428 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 FCER2P06734 321 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 UMODP07911 640 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 CD63P08962 238 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 COX6A1P12074 109 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 LIFP15018 202 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ZNF250P15622 560 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 HIST1H1DP16402 221 aaKnown RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 ZNF20P17024 532 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ZNF43P17038 809 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MSR1P21757 451 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 FPR2P25090 351 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 CD34P28906 385 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ZNF93P35789 620 aaPredicted RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 ECI1P42126 302 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 CX3CR1P49238 355 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ZNF84P51523 738 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 DSCR4P56555 118 aaPredicted RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 TMEM50BP56557 158 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 DEFA6Q01524 100 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MC2RQ01718 297 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 NAAAQ02083 359 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ECH1Q13011 328 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 CHAF1BQ13112 559 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MFAP5Q13361 173 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ENDOGQ14249 297 aaKnown RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 HNF4GQ14541 408 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 SSX2Q16385 188 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MICBQ29980 383 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 GFOD2Q3B7J2 385 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 OTPQ5XKR4 325 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 TCEAL6Q6IPX3 200 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 LCN10Q6JVE6 187 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 OPN5Q6U736 354 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 SHISA6Q6ZSJ9 500 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MOB3CQ70IA8 216 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 TRAPPC6BQ86SZ2 158 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 UBALD2Q8IYN6 164 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 SPAG16Q8N0X2 631 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 TMEM123Q8N131 208 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 BEST3Q8N1M1 668 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ACBD4Q8NC06 268 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 BVESQ8NE79 360 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 OR4K17Q8NGC6 315 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 OR56B1Q8NGI3 324 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 OR2AJ1Q8NGZ0 328 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 OR1S1Q8NH92 325 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 STOML3Q8TAV4 291 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 PP6455Q8WZ26 134 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 GTF3AQ92664 365 aaKnown RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 LURAP1Q96LR2 239 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 SCGB3A2Q96PL1 93 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 CDC6Q99741 560 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MESP1Q9BRJ9 268 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 EMC6Q9BV81 110 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 SF3B5Q9BWJ5 86 aaKnown RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 DEFB126Q9BYW3 111 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 NMES1Q9C002 83 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MFFQ9GZY8 342 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 ARL6Q9H0F7 186 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 NELFAQ9H3P2 528 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 TMEM185BQ9H7F4 350 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 FN3KRPQ9HA64 309 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 BARX1Q9HBU1 254 aaPredicted RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 CENPMQ9NSP4 180 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 DECR2Q9NUI1 292 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 GTF2A1LQ9UNN4 478 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 GPR132Q9UNW8 380 aa4.42□□□□□ -1.7
SDC2-204ENST00000519914 MRPS18CQ9Y3D5 142 aaKnown RBP4.42□□□□□ -1.7
SDC2-204ENST00000519914 FXYD6-FXYD2A0A087WZ82 144 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 IGKV1-9A0A0C4DH69 117 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 MEIS3P1A6NDR6 274 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 OR2AT4A6NND4 320 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 ZNF726A6NNF4 738 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 SERPINE3A8MV23 424 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 B4E171 279 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 D6RAR5 112 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 H3BML4 177 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 H3BSH0 61 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 SULT2B1O00204 365 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 SGCEO43556 437 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 ZIC3O60481 467 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 KLF7O75840 302 aaPredicted RBP4.41□□□□□ -1.7
SDC2-204ENST00000519914 DHRS3O75911 302 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 SFT2D2O95562 160 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 PTBP3O95758 552 aaKnown RBP4.41□□□□□ -1.7
SDC2-204ENST00000519914 PLATP00750 562 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 HLA-AP01891 365 aaKnown RBP4.41□□□□□ -1.7
SDC2-204ENST00000519914 CRHP06850 196 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 QDPRP09417 244 aa4.41□□□□□ -1.7
SDC2-204ENST00000519914 FBP1P09467 338 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms