RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TMEM19Q96HH6 336 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 CCDC140Q96MF4 163 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 RABEP2Q9H5N1 569 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 EGLN3Q9H6Z9 239 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 MEPEQ9NQ76 525 aaPredicted RBP4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 SNX24Q9Y343 169 aa4.99□□□□□ -1.61
CTNNA1-216ENST00000519489 A0A1W2PRG6 482 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 OR11H12B2RN74 326 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 BHLHE40O14503 412 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 FGF16O43320 207 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 SPRY2O43597 315 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 PTP4A3O75365 173 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 RBMXL2O75526 392 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 LYPLA1O75608 230 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 TPPPO94811 219 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 IGLV1-47P01700 117 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 ALDOCP09972 364 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 FUT1P19526 365 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 NAA10P41227 235 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 ESRRGP62508 458 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 TOP3AQ13472 1001 aaPredicted RBP4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 AQP6Q13520 282 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 DIAPH2-AS1Q14236 149 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 RBMS2Q15434 407 aaKnown RBP4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 C6orf136Q5SQH8 315 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 TPTE2P1Q5T6R2 138 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 C1orf134Q5TEV5 83 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 CCDC144NLQ6NUI1 221 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 CORO6Q6QEF8 472 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 CALHM1Q8IU99 346 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 OR52L1Q8NGH7 329 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 CASTOR1Q8WTX7 329 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 SLC35B4Q969S0 331 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 ALG12Q9BV10 488 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 ABCG5Q9H222 651 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 INIPQ9NRY2 104 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 C14orf119Q9NWQ9 140 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 ATPIF1Q9UII2 106 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 ZNF229Q9UJW7 825 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 LHFPL6Q9Y693 200 aa4.98□□□□□ -1.61
CTNNA1-216ENST00000519489 PRSS51A0A1B0GVH4 220 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 hCG_1809904A0A1W2PP81 198 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 A0A1W2PPE2 198 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 A0A1W2PR64 198 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 A0A1W2PRV1 198 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 FAM172BPA6NC97 362 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 G3V318 75 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 H0Y980 276 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 LCATP04180 440 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 CD34P28906 385 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 DCTDP32321 178 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 BMI1P35226 326 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 FUSP35637 526 aaKnown RBP eCLIP4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 DAP3P51398 398 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 BDH1Q02338 343 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 IL18R1Q13478 541 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 MEP1BQ16820 701 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 DEFB135Q30KP9 77 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 GLYATL3Q5SZD4 288 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 LELP1Q5T871 98 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 KANK2Q63ZY3 851 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 MRPL21Q7Z2W9 205 aaKnown RBP4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 NANOGNBQ7Z5D8 188 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 THNSL2Q86YJ6 484 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 PGAM4Q8N0Y7 254 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 Q8N9W7 124 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 OR8J2Q8NGG1 315 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 OR10Z1Q8NGY1 313 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 OR56B4Q8NH76 319 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 C17orf77Q96MU5 243 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 ZBTB18Q99592 522 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 COQ7Q99807 217 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 CHCHD6Q9BRQ6 235 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 SCRT1Q9BWW7 348 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 CLEC7AQ9BXN2 247 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 TMEM133Q9H2Q1 129 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 FBXL7Q9UJT9 491 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 EMCNQ9ULC0 261 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 WSB1Q9Y6I7 421 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 COMMD3-BMI1R4GMX3 469 aa4.97□□□□□ -1.61
CTNNA1-216ENST00000519489 IGHV4-4A0A075B6R2 117 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 GGT3PA6NGU5 568 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 C9orf118A6NHY6 69 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 CCDC154A6NI56 674 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 RFPL4AA6NLU0 287 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 TMEM114B3SHH9 223 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 F5H5K5 113 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 RFPL4AL1F8VTS6 287 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 PGRMC1O00264 195 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 AZIN1O14977 448 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 POLR3GO15318 223 aaPredicted RBP4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 MTRF1O75570 445 aaKnown RBP4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 OR5F1O95221 314 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 RBP4P02753 201 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 IFNA4P05014 189 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 CSN3P07498 182 aa4.96□□□□□ -1.62
CTNNA1-216ENST00000519489 GSTA1P08263 222 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms