RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 RBFOX1Q9NWB1 397 aaKnown RBP12.93□□□□□ -0.34
TRAPPC9-205ENST00000518839 COQ3Q9NZJ6 369 aa12.93□□□□□ -0.34
TRAPPC9-205ENST00000518839 OSGIN2Q9Y236 505 aa12.93□□□□□ -0.34
TRAPPC9-205ENST00000518839 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
TRAPPC9-205ENST00000518839 ASPMQ8IZT6 3477 aa12.93□□□□□ -0.34
TRAPPC9-205ENST00000518839 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 H7C417 338 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 CCL21O00585 134 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 LANCL1O43813 399 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 ORC5O43913 435 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 GSTP1P09211 210 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 GTF2F2P13984 249 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 SERPINA2P20848 420 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 KITLGP21583 273 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 VEGFCP49767 419 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 ACTBP60709 375 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 ACTG1P63261 375 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 RNASE12Q5GAN4 147 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 DMRTC1Q5HYR2 192 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 MBNL2Q5VZF2 373 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 SEZ6L2Q6UXD5 910 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 CCBE1Q6UXH8 406 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 ACBD4Q8NC06 268 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 TMEM104Q8NE00 496 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 KLF14Q8TD94 323 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 HPSE2Q8WWQ2 592 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 CCDC120Q96HB5 630 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 RNF170Q96K19 258 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 RTL8AQ9BWD3 113 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 MTFP1Q9UDX5 166 aa12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 TLN1Q9Y490 2541 aaKnown RBP12.92□□□□□ -0.34
TRAPPC9-205ENST00000518839 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 FAM240BA0A1B0GVZ2 78 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 ZNF732B4DXR9 585 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 AKR7A2O43488 359 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 HTR3BO95264 441 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 LPLP06858 475 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 MELTFP08582 738 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 CSF1P09603 554 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 CHRNB4P30926 498 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 CALCRP30988 508 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 CCKARP32238 428 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 FAUP35544 74 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 RFX2P48378 723 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 PSG7Q13046 419 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 KLF9Q13886 244 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 PNLIPRP3Q17RR3 467 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 ZNF260Q3ZCT1 412 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 FBXL19-AS1Q494R0 122 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 RGS7BPQ6MZT1 257 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 Q6ZTK2 550 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 NRARPQ7Z6K4 114 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 TMEM200AQ86VY9 491 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 ZNF611Q8N823 705 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 CHST4Q8NCG5 386 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 BHLHE23Q8NDY6 225 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 OR51T1Q8NGJ9 327 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 OR8S1Q8NH09 359 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 GPX8Q8TED1 209 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 AQP3Q92482 292 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 GAL3ST1Q99999 423 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 PKIBQ9C010 78 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 SELENOIQ9C0D9 397 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 BANF2Q9H503 90 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 NGBQ9NPG2 151 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 ZNF107Q9UII5 783 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 PURGQ9UJV8 347 aaKnown RBP12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 DMXL2Q8TDJ6 3036 aa12.91□□□□□ -0.34
TRAPPC9-205ENST00000518839 MAP1BP46821 2468 aaKnown RBP12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 ANKRD20A5PA0PJZ0 165 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 TMEM210A6NLX4 147 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 PRSS44E7EML9 344 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 SPRY1O43609 319 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 PTAFRP25105 342 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 GLRXP35754 106 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 GPM6AP51674 278 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 ERVS71-1P61550 626 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 MZT1Q08AG7 82 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 MOGAT2Q3SYC2 334 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 CDNFQ49AH0 187 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 TMEM108Q6UXF1 575 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 SPERTQ8NA61 448 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 OR8G5Q8NG78 346 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 OR51F2Q8NH61 342 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 RAB3CQ96E17 227 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 RHOFQ9HBH0 211 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 TMEM100Q9NV29 134 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 NKIRAS2Q9NYR9 191 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 NPAP1Q9NZP6 1156 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 COPZ2Q9P299 210 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 PIEZO2Q9H5I5 2752 aa12.9□□□□□ -0.34
TRAPPC9-205ENST00000518839 A0A1B0GUH1 482 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms