RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GLT1D1Q96MS3 346 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 TESK2Q96S53 571 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 TMEM222Q9H0R3 208 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 ATG10Q9H0Y0 220 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR2D2Q9H210 308 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 TMEM206Q9H813 350 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 NOL7Q9UMY1 257 aaKnown RBP-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 KCNIP3Q9Y2W7 256 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 SPTBN4Q9H254 2564 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 MYO18AQ92614 2054 aaKnown RBP-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 LAMC1P11047 1609 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 SETD5Q9C0A6 1442 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 IGSF23A1L1A6 192 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 CDC7O00311 574 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 RGS16O15492 202 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 SOX15O60248 233 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 C1QAP02745 245 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 FXYD6P3P58550 94 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 TAS2R46P59540 309 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 GLO1Q04760 184 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 MESDQ14696 234 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 QPRTQ15274 297 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 TCP11X2Q5H9J9 407 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 HHATQ5VTY9 493 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 RTL4Q6ZR62 310 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 Q6ZSR6 202 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 GKN2Q86XP6 184 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 CCDC65Q8IXS2 484 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 C3orf56Q8N813 242 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZDHHC22Q8N966 263 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR2G2Q8NGZ5 317 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR4C6Q8NH72 309 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 DCAKDQ8WVC6 231 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 CFAP36Q96G28 342 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 ERO1AQ96HE7 468 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 PYURFQ96I23 114 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 CPB2Q96IY4 423 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 VSTM2LQ96N03 204 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 GBP5Q96PP8 586 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR8B4Q96RC9 309 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 ACP6Q9NPH0 428 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 RPRD1BQ9NQG5 326 aaKnown RBP-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 LINC00588Q9Y4M8 146 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 HES2Q9Y543 173 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 GMEB1Q9Y692 573 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 HEATR5AQ86XA9 2040 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 CUX2O14529 1486 aa-2.39□□□□□ -2.79
RNU6-542P-201ENST00000516405 F5P12259 2224 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 LAMC3Q9Y6N6 1575 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CELSR3Q9NYQ7 3312 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 GREB1Q4ZG55 1949 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 TRAV41A0A0B4J266 112 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 LOC100653049A0A140TA62 436 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 C11orf86A6NJI1 115 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 M0R2N4 97 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 TIMM17BO60830 172 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 KRT34O76011 436 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 LDHAP00338 332 aaKnown RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 SOD1P00441 154 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 HLA-AP01891 365 aaKnown RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 LDHCP07864 332 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 FREM3P0C091 2139 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 AREGP15514 252 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CALRP27797 417 aaKnown RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZNF93P35789 620 aaPredicted RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 VHLP40337 213 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 RPL27AP46776 148 aaKnown RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 NDUFA8P51970 172 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 PLTPP55058 493 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 SSTP61278 116 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CDK10Q15131 360 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 ELOBQ15370 118 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 ARHGAP11BQ3KRB8 267 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 SLC36A3Q495N2 470 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 KCTD21Q4G0X4 260 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 C6orf99Q4VX62 202 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CCDC73Q6ZRK6 1079 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CCDC80Q76M96 950 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 ITPRIPQ8IWB1 547 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 SLC22A24Q8N4F4 322 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 TCP10LQ8TDR4 215 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 RXFP4Q8TDU9 374 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 ACMSDQ8TDX5 336 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CYGBQ8WWM9 190 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 SECISBP2Q96T21 854 aaKnown RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CHRNA10Q9GZZ6 450 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 TXNL4BQ9NX01 149 aaKnown RBP-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 RDH8Q9NYR8 311 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 IL36GQ9NZH8 169 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 PGAP2Q9UHJ9 254 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 TMCO1Q9UM00 188 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 PSMD13Q9UNM6 376 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 CCL27Q9Y4X3 112 aa-2.4□□□□□ -2.79
RNU6-542P-201ENST00000516405 PCDH11XQ9BZA7 1347 aa-2.41□□□□□ -2.79
RNU6-542P-201ENST00000516405 ANKRD11Q6UB99 2663 aaPredicted RBP-2.41□□□□□ -2.79
RNU6-542P-201ENST00000516405 SMARCA4P51532 1647 aa-2.41□□□□□ -2.8
RNU6-542P-201ENST00000516405 LRP5LA4QPB2 252 aa-2.41□□□□□ -2.8
RNU6-542P-201ENST00000516405 C5orf67F2Z3F1 127 aa-2.41□□□□□ -2.8
RNU6-542P-201ENST00000516405 H0Y626 953 aa-2.41□□□□□ -2.8
RNU6-542P-201ENST00000516405 J3KRW8 73 aa-2.41□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms