RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 MRPS30Q9NP92 439 aaKnown RBP0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TMEM100Q9NV29 134 aa0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TMEM38BQ9NVV0 291 aa0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 MYEF2Q9P2K5 600 aaKnown RBP0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 STX18Q9P2W9 335 aaKnown RBP0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 CES1P1Q9UKY3 287 aa0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 MCTS1Q9ULC4 181 aaKnown RBP0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 CAB39Q9Y376 341 aaPredicted RBP0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 PPIL1Q9Y3C6 166 aa0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SAR1BQ9Y6B6 198 aa0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SHANK3Q9BYB0 1731 aa0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ZNF638Q14966 1978 aaKnown RBP0.54□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TENM3Q9P273 2699 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 IGLL5B9A064 214 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 OVOL1O14753 267 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ERLIN1O75477 346 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 WBP4O75554 376 aaKnown RBP0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 LCA5LO95447 670 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 AGTP01019 485 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 CATP04040 527 aaKnown RBP0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SEC11BP0C7V7 166 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SLC1A2P43004 574 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 RGS6P49758 472 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 AP1S2P56377 157 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ATP5G2Q06055 141 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 MERTKQ12866 999 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TFDP2Q14188 446 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ZNF181Q2M3W8 571 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 KLHL40Q2TBA0 621 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TWF2Q6IBS0 349 aaKnown RBP0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TMEM53Q6P2H8 277 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TMEM144Q7Z5S9 345 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 PRNTQ86SH4 94 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SLC30A8Q8IWU4 369 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 DAW1Q8N136 415 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 WDR31Q8NA23 367 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ITFG1Q8TB96 612 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TSEN15Q8WW01 171 aaKnown RBP0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 APH1AQ96BI3 265 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 FXYD5Q96DB9 178 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 YIPF6Q96EC8 236 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ZNF75AQ96N20 296 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 C20orf166-AS1Q96NR2 134 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SCGB3A2Q96PL1 93 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 DERL3Q96Q80 235 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 PLIN2Q99541 437 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 TMEM175Q9BSA9 504 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ELOVL6Q9H5J4 265 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 LYRM4Q9HD34 91 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 CD209Q9NNX6 404 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 PRSS16Q9NQE7 514 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 INIPQ9NRY2 104 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ZNF443Q9Y2A4 671 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 ELP1O95163 1332 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 JCADQ9P266 1359 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 SPATA31E1Q6ZUB1 1445 aa0.53□□□□□ -2.32
RNU6-1278P-201ENST00000516130 FLG2Q5D862 2391 aaPredicted RBP0.53□□□□□ -2.33
RNU6-1278P-201ENST00000516130 STRCP1A6NGW2 1772 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 COL6A6A6NMZ7 2263 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 A0A0G2JMP0 313 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 A0A0X1KG70 313 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 GGTLC3B5MD39 225 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 UPK1AO00322 258 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 SIVA1O15304 175 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 XRCC2O43543 280 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 IGHV3-53P01767 116 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 TRGV3P03979 118 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 CTSGP08311 255 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 KRT16P08779 473 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 UBCP0CG48 685 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 GFAPP14136 432 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 ZNF708P17019 499 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 GSTM3P21266 225 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 HMOX2P30519 316 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 RPS5P46782 204 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 ERFP50548 548 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 TAS2R39P59534 338 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 ATP6V0D1P61421 351 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 DEFB103AP81534 67 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 BEX3Q00994 111 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 IL5RAQ01344 420 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 C5orf64Q2M2E5 130 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 FBXL19-AS1Q494R0 122 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 CLEC18BQ6UXF7 455 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 TRMT10CQ7L0Y3 403 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 BZW1Q7L1Q6 419 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 CENPQQ7L2Z9 268 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 SSX9Q7RTT3 188 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 COMTD1Q86VU5 262 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 EIF4E3Q8N5X7 224 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 ZNF555Q8NEP9 628 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 FAM81AQ8TBF8 368 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 RBPMSQ93062 196 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 ISG20Q96AZ6 181 aaKnown RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 JSRP1Q96MG2 331 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 OPALINQ96PE5 141 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 GSDMAQ96QA5 445 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 NAPGQ99747 312 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 BPIFA3Q9BQP9 254 aa0.52□□□□□ -2.33
RNU6-1278P-201ENST00000516130 TBL1XR1Q9BZK7 514 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms